CX047404

Overview
NameCX047404
Unique NameCX047404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32
Identity = 80/195 (41.03%), Postives = 104/195 (53.33%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAA--GGLEEESSYPYIGKRG 740
            + F  F QK+ + Y +  +   RL +F +N+  A  H   +P A  GVTPFSDL+ EEF S Y     G          +     +E+ G P   DWR +GAVT VK QG CGSCWAFS  G VE   F+A   L +LSEQ LV CD +         D+GCSGGLM NA+++++    G +  E SYPY    G
Sbjct:   36 SQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRY---HNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEG 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32
Identity = 77/181 (42.54%), Postives = 104/181 (57.46%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMME-IDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            R  +F  N++       +D      +  F+D++  EF S Y G K    +M  G    S   M E +  +P + DWR KGAVT+VK QG CGSCWAFST  AVEG N I T  L+SLSEQ+LVDCD     KE+   + GC+GGLM +A++++   GG+  ES+YPY  + G C  D  K+
Sbjct:   59 RFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCD-----KEE---NQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTC--DESKV 229          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.582e-32
Identity = 82/213 (38.50%), Postives = 110/213 (51.64%), Query Frame = 3
Query:  144 LGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLI--AAGGLEEESSYPYIGKRG---KCQFDSEKI 767
            +G+     F+ F + Y ++Y T  +   RL  F +N+    EHQ  +P A  G+T F DLSE EF + Y               +       ++  +P+  DWR+KGAVT VK QGACGSCWAFS  G +EG  ++A   L+SLSEQQLV CD   D         GC GGLM  A+ +L+    G L  E SYPY+   G   +C   SE +
Sbjct:   30 VGTPAAALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELV 233          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 81/209 (38.76%), Postives = 120/209 (57.42%), Query Frame = 3
Query:  162 NNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATG---NLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGK-CQFDSEKIAVR 776
            N F  +MQ ++++Y++ E++  R  IF  NM    +        V G+  F+D++ +E+ + Y G        DG  L  +  + +     P   DWR +GAVT +K QG CG CW+FSTTG+ EGA+FIA+G   +L+SLSEQ L+DC        K   +NGC GGLMT A++Y+I   G++ ESSYPY  + GK C+F +  I  +
Sbjct:   28 NAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTP-----FDGSALIGTEEEKIFSTPAP-TVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDC-------SKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQ 222          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 76/181 (41.99%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMME-IDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            R  +F  N++       +D      +  F+D++  EF S Y G K   P M  G    +   M E +  +P + DWR KGAVT+VK QG CGSCWAFST  AVEG N I T  L++LSEQ+LVDCD     KE+   + GC+GGLM +A++++   GG+  ES+YPY  + G C  D+ K+
Sbjct:   59 RFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCD-----KEE---NQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTC--DASKV 229          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 79/197 (40.10%), Postives = 112/197 (56.85%), Query Frame = 3
Query:  168 FKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDP-TAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFD 755
            F  F  ++ + Y +  +   RL IF +N+    E    +  +A +G+T F+D++  E++   TG+         GG  S++V       LP+ FDWR K AVT+VK QG+CGSCWAFS TG +EG   + TG L   SEQ+L+DCD         T D+ C+GGLM NAYK +   GGLE E+ YPY  K+ +C F+
Sbjct:  308 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGG--SAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFN 492          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32
Identity = 83/219 (37.90%), Postives = 125/219 (57.08%), Query Frame = 3
Query:  120 TDNPGHLLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGL---PENFDWRDKG-AVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            T     L + +  + +FK +M++++K+Y++ E Y HRL +FA N  +   H   + T    +  FSD+S  E +  +   +   P+        S+ K   + G    P + DWR KG  V+ VK QGAC SCW FSTTGA+E A  IA+G +LSL+EQQLVDC  + +       ++GC GGL + A++Y++   G+ EE SYPYIGK   C+F+ +K
Sbjct:   17 TGATAELTVNAIEKFHFKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE---PQ------NCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQK 218          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.013e-32
Identity = 80/212 (37.74%), Postives = 114/212 (53.77%), Query Frame = 3
Query:  150 SATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAE----HQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGLPEN--FDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEKI 767
            +A   +++ F  K+ + Y   E+  +RL +F  N+    E    ++  + T    +  FSD++ E+F ++  G K GP           +      D  PE+   DWR KGAVT VK QG CGSCWAFSTTG +EG +F+ TG L+SLSEQQLVDC            + GC+GG +  A  Y+   GG++ ESSYPY  +   C+F+S  I
Sbjct:   14 AAANPSWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGP---------RPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGG------SYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTCRFNSNTI 210          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 137.887 bits (346), Expect = 6.013e-32
Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 3
Query:  138 LLLGSATENNFKIFMQKYEKSYATREDYVHRLGIFAKNMIRAAEHQLLDPTAVHGVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKMMEIDGL---PENFDWRDKGA-VTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKCQFDSEK 764
            L + S  + +FK +M K+ K+Y+T E+Y HRL  FA N  +   H   + T    +  FSD+S  E +  Y   +   P+        S+ K   + G    P + DWR KG  V+ VK QGACGSCW FSTTGA+E A  IATG +LSL+EQQLVDC    +       ++GC GGL + A++Y++   G+  E +YPY GK G C+F   K
Sbjct:   25 LCVNSLEKFHFKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSE---PQ------NCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGK 220          
BLAST of CX047404 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32
Identity = 76/180 (42.22%), Postives = 103/180 (57.22%), Query Frame = 3
Query:  228 RLGIFAKNMIRAAEHQLLDPTAVH--GVTPFSDLSEEEFESMYTGMKGGPPEMDGGGLESSSVKM-----MEIDGLPENFDWRDKGAVTEVKMQGACGSCWAFSTTGAVEGANFIATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAAGGLEEESSYPYIGKRGKC 746
            R  IF  N+     H   +  A +  G+T F++L+ +E+ S+Y G +  P        ++ +V M     + +D +P   DWR KGAV  +K QG CGSCWAFST  AVEG N I TG L+SLSEQ+LVDCD S         + GC+GGLM  A+++++  GGL  E  YPY G  GKC
Sbjct:   28 RFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRI---TKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKS--------YNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKC 196          
The following BLAST results are available for this feature:
BLAST of CX047404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CYSP_TRYCR1.212e-3241.03Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSEP_VIGMU1.212e-3242.54Vignain OS=Vigna mungo PE=1 SV=1[more]
LMCPB_LEIME1.582e-3238.50Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP4_DICDI2.067e-3238.76Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CYSEP_PHAVU2.067e-3241.99Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CPR1_DROME2.067e-3240.10Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATH_MOUSE2.699e-3237.90Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP1_HOMAM6.013e-3237.74Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATH_HUMAN6.013e-3240.38Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CYSP4_BRANA7.854e-3242.22Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14A03_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14A03-B5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047404 ID=CX047404; Name=CX047404; organism=Citrus sinensis; type=EST; length=776bp
AGAAGATGGCAGCAACACAAAGCCCAGCTCTAACATGCGCCATCGGAGTA
ACCCTCTTGACCTACGCACTCACACTCTCTTCAGCTCTAGTTCCACAAAA
CCCGACCATACGCCAAGTCACAGACAATCCCGGTCATCTGCTTCTGGGAT
CTGCCACAGAGAACAACTTCAAGATTTTCATGCAGAAGTACGAGAAAAGC
TATGCTACTAGAGAGGACTACGTGCACCGGCTGGGGATTTTCGCCAAGAA
TATGATCAGGGCCGCTGAGCACCAGCTGCTCGATCCGACGGCTGTGCATG
GGGTCACCCCTTTCTCTGATTTGTCCGAGGAGGAGTTTGAGAGTATGTAC
ACTGGGATGAAAGGTGGGCCCCCTGAGATGGACGGTGGAGGTTTGGAGAG
TAGTAGTGTAAAGATGATGGAGATTGATGGATTGCCTGAGAATTTTGATT
GGAGAGACAAAGGTGCTGTCACTGAGGTCAAGATGCAGGGAGCATGTGGG
TCATGCTGGGCTTTTAGCACTACAGGAGCTGTTGAAGGAGCCAACTTCAT
TGCGACTGGGAATCTTCTGAGTCTTAGCGAGCAGCAGCTTGTAGATTGTG
ATCACTCGTGTGATATAAAGGAGAAGGGTACTTGTGACAATGGTTGTTCT
GGAGGCCTCATGACAAATGCATACAAATATTTGATCGCGGCTGGAGGGCT
AGAAGAGGAGAGTTCATATCCTTATATTGGGAAGCGTGGCAAATGCCAAT
TCGATTCAGAGAAAATAGCCGTTCGA
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