CX047258

Overview
NameCX047258
Unique NameCX047258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: MKH1_SCHPO (MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe GN=mkh1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 69/180 (38.33%), Postives = 106/180 (58.89%), Query Frame = 3
Query:   60 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQ------LEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY-TWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAK---AITMNDVK-SCKGSPFWMAPEV 563
            W KG  +G+G++G V+     + G   AVK+V +  Q   G    L+      +  EIS+++  +H NIVQY G EK E  + IFLE V+ GS+ +  + Y   + Q+  + + Q+L GL YLH + +IHRD+K  N+L++ +G  K++DFG++K    +  ND   S +GS FWMAPEV
Sbjct:  825 WMKGELIGNGTYGKVFLAMNINTGELIAVKQVEIP-QTINGRHDQLRKDIVDSINAEISMIADLDHLNIVQYLGFEKTETDISIFLEYVSGGSIGRCLRNYGPFEEQLVRFVSRQVLYGLSYLHSKGIIHRDLKADNLLIDFDGVCKISDFGISKHSDNVYDNDANLSMQGSIFWMAPEV 1003          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: SVKA_DICDI (Serine/threonine-protein kinase svkA OS=Dictyostelium discoideum GN=svkA PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25
Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAIT--MNDVKSCKGSPFWMAPEV 563
            +G GSFG V++G         A+K + L+D     E  +  ++QEI++LS+ E   + +YFG+    +KL+I +E +  GS+  + +     +  ++    ++L GL+YLH +  IHRDIK AN+L++A+G VKLADFG++  +T  M    +  G+PFWMAPEV
Sbjct:   18 IGKGSFGEVFKGINKKTNETIAIKTIDLED----AEDEIEDIQQEINVLSQCESPFVTKYFGSFLKGSKLWIIMEYLAGGSVLDLMKPGPFDEGYIAIILRELLKGLEYLHSEGKIHRDIKAANVLLSASGDVKLADFGVSGQLTDQMTKRNTFVGTPFWMAPEV 178          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: STK24_MOUSE (Serine/threonine-protein kinase 24 OS=Mus musculus GN=Stk24 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25
Identity = 62/165 (37.58%), Postives = 101/165 (61.21%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVK--SCKGSPFWMAPEV 563
            +G GSFG V++G  +      A+K + L++     E  +  ++QEI++LS+ +   + +Y+G+   + KL+I +E +  GS   + +   L + Q++    +IL GL YLH +  IHRDIK AN+L++ +G VKLADFG+A  +T   +K  +  G+PFWMAPEV
Sbjct:   30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDEIQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 190          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.330e-25
Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 3
Query:   48 RIMSWQKGAPLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVK--SCKGSPFWMAPE 560
            +I  +  G  +G G+FG V++G     G F A+K++   D     E S+  ++ E+ +L +  H+NIV+  G  + + +L   LE V  GSL  + +++  L +     Y +Q+L GL YLH   VIHRDIK +NIL+   G +KLADFG+A  I        S  G+P+WMAPE
Sbjct:   32 KIGEYTLGEKIGRGAFGQVFKGLNGKTGEFVAIKQI---DSNKIDESSLQSVKGEVEILHKLRHNNIVKVLGVVEVQAQLNFILEYVENGSLRDVIEKFGPLSEELCIIYLYQMLQGLAYLHSNKVIHRDIKASNILITKEGVIKLADFGVASQIDSESQLRFSVVGTPYWMAPE 203          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: SID1_SCHPO (Serine/threonine-protein kinase sid1 OS=Schizosaccharomyces pombe GN=sid1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.419e-25
Identity = 66/166 (39.76%), Postives = 102/166 (61.45%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNAN-GSVKLADFGLAKAIT--MNDVKSCKGSPFWMAPEV 563
            LGSGSFG V++   +  G   A+K++ L+     G   +  +EQE+ +LS     N++QY+G   D   L+I +E +  GS++ + +   L +  +S    ++L GL YLH QN IHRDIK ANIL++++ G+VKLADFG+A  ++   +   +  G+PFWMAPEV
Sbjct:   15 LGSGSFGVVWKARENVSGDIIAIKQIDLET----GIDDITDIEQEVFMLSNCNSSNVIQYYGCFVDGYTLWILMEHMDGGSVSGLLKMGRLNEQVISIILREVLYGLNYLHGQNKIHRDIKAANILLSSSTGNVKLADFGVAAQLSNAASRRHTFVGTPFWMAPEV 176          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: MST4_MOUSE (Serine/threonine-protein kinase MST4 OS=Mus musculus GN=Mst4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVK--SCKGSPFWMAPEV 563
            +G GSFG V++G  +      A+K + L++     E  +  ++QEI++LS+ +   + +Y+G+    +KL+I +E +  GS   + +     + Q++    +IL GL YLH +  IHRDIK AN+L++  G VKLADFG+A  +T   +K  +  G+PFWMAPEV
Sbjct:   30 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 190          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: MST4_HUMAN (Serine/threonine-protein kinase MST4 OS=Homo sapiens GN=MST4 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMNDVK--SCKGSPFWMAPEV 563
            +G GSFG V++G  +      A+K + L++     E  +  ++QEI++LS+ +   + +Y+G+    +KL+I +E +  GS   + +     + Q++    +IL GL YLH +  IHRDIK AN+L++  G VKLADFG+A  +T   +K  +  G+PFWMAPEV
Sbjct:   30 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 190          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: DST1_DICDI (Serine/threonine-protein kinase dst1 OS=Dictyostelium discoideum GN=dst1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.158e-24
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAI--TMNDVKSCKGSPFWMAPEV 563
            LG GSFG V++     +G   A+K +SL DQ     +++  + +EIS+L+   + NIVQYFG+   +++L+I +E    GS++ + Q    + + +++    + L GL YLHE   IHRDIK  NIL+N  G VKLADFG++  +  T +   +  G+P+WMAPEV
Sbjct:   35 LGKGSFGQVFKAVHFANGKVVAIKIISLDDQ-----EAIKDVRKEISILAECNYPNIVQYFGSYFKDHQLWIVMEYCGGGSVSDLLQVIDTISEDEIALICREALKGLNYLHEFKKIHRDIKGGNILLNDRGEVKLADFGVSAQLFNTFSKRNTFVGTPYWMAPEV 195          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: M3K4_MOUSE (Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24
Identity = 61/190 (32.11%), Postives = 102/190 (53.68%), Query Frame = 3
Query:   15 YNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITMN------DVKSCKGSPFWMAPEV 563
            Y+  ++   R+    WQ+G  +G G +G VY   + D G   A+KE+  Q       +++ +   E+ +    +H N+V+YFG E    ++YIF+E   +G+L ++     L++  +  YT QI   +  LHE  ++HRDIK ANI + ++G +KL DFG +  +  N      +V S  G+  +MAPEV
Sbjct: 1317 YDNVMHVGLRKVTFKWQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPND---HKTIKETADELKIFEGIKHPNLVRYFGVELHREEMYIFMEYCDEGTLEEV-SRLGLQEHVIRLYTKQITVAINVLHEHGIVHRDIKGANIFLTSSGLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEV 1502          
BLAST of CX047258 vs. ExPASy Swiss-Prot
Match: PAKA_DICDI (Serine/threonine-protein kinase pakA OS=Dictyostelium discoideum GN=pakA PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23
Identity = 66/193 (34.20%), Postives = 110/193 (56.99%), Query Frame = 3
Query:   78 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLSRFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI---YQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHRDIKCANILVNANGSVKLADFGLAKAITM--NDVKSCKGSPFWMAPEVKR*KS-EVGLDEETGKKMSRETVEG 635
            +G G  G V+E          A+K++ L+       Q++  +  EI ++    H+NIVQY  +    ++L++ +E ++ G L ++   Y++  L +SQ++    ++L GL+Y+H+ N IHRDIK  NIL+ ANG +KLADFG A  +T    +  S  G+P+WMAPE+ R  + +  +D  +   M+RE  EG
Sbjct:  917 IGEGGAGEVFEAINSRTNQTIAIKKMKLK------AQNLKTVINEIGMMKNSNHENIVQYIDSYIVADELWVAMEFMSGGCLTEVLDQYRDIQLNESQIAFVCQEVLRGLEYIHKFNRIHRDIKSDNILIGANGEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEG 1103          
The following BLAST results are available for this feature:
BLAST of CX047258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MKH1_SCHPO1.495e-2538.33MAP kinase kinase kinase mkh1 OS=Schizosaccharomyc... [more]
SVKA_DICDI1.952e-2537.58Serine/threonine-protein kinase svkA OS=Dictyostel... [more]
STK24_MOUSE1.952e-2537.58Serine/threonine-protein kinase 24 OS=Mus musculus... [more]
Y4251_DICDI3.330e-2537.14Probable serine/threonine-protein kinase DDB_G0284... [more]
SID1_SCHPO7.419e-2539.76Serine/threonine-protein kinase sid1 OS=Schizosacc... [more]
MST4_MOUSE1.653e-2436.97Serine/threonine-protein kinase MST4 OS=Mus muscul... [more]
MST4_HUMAN1.653e-2436.97Serine/threonine-protein kinase MST4 OS=Homo sapie... [more]
DST1_DICDI2.158e-2439.16Serine/threonine-protein kinase dst1 OS=Dictyostel... [more]
M3K4_MOUSE6.280e-2432.11Mitogen-activated protein kinase kinase kinase 4 O... [more]
PAKA_DICDI1.071e-2334.20Serine/threonine-protein kinase pakA OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_13A12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-13A12-A24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047258 ID=CX047258; Name=CX047258; organism=Citrus sinensis; type=EST; length=796bp
TTATGGAATTGGTTTATAATTTTTCCCTGAATGAGAAATACAGAAGAAGA
ATCATGTCCTGGCAAAAGGGTGCCCCTTTGGGGAGTGGGTCGTTTGGGTC
TGTGTATGAAGGTTTCACTGATGATGGATTCTTTTTTGCTGTGAAGGAGG
TTTCTTTACAGGATCAAGGAACTCAGGGAGAGCAGAGCGTTCTTCAACTT
GAGCAGGAAATTTCTCTTTTGAGTCGGTTTGAACATGATAACATAGTTCA
GTATTTTGGGACAGAAAAGGATGAAAATAAGCTTTATATCTTCCTTGAAC
TTGTAACGCAAGGCTCACTTGCAAAAATCTATCAAGAGTATCACTTGAAG
GATTCTCAAGTCTCTGCATACACATGGCAGATCCTGAATGGCTTAAAGTA
TCTTCATGAGCAGAATGTGATTCACAGGGATATCAAATGTGCAAATATAT
TGGTAAATGCAAATGGATCAGTAAAACTTGCAGATTTTGGGCTGGCAAAG
GCAATTACAATGAATGATGTCAAATCTTGCAAAGGATCTCCATTCTGGAT
GGCCCCTGAGGTAAAGCGGTAGAAATCAGAGGTAGGACTGGATGAAGAAA
CTGGGAAAAAAATGTCAAGAGAAACCGTAGAAGGTTTAGGTAATGCCTTG
AGAAGGAAATGGCATGTCAGTAGATGGAACAGTCTAACAGATCAAGTAAA
TATGCACTGATCCAAGCCTCTAAATATTGTGTATTGGTCAACAATGGGCA
AGTAGATTCTTTGAATAATTATATGGGGAAACTTTCAGAAATTCAA
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