CX047227

Overview
NameCX047227
Unique NameCX047227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQ--EIFKKNIEGATKF----LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 650
            +DS+  KE++ GI++E +   + +GAV+V+IGAN S               KV +IV++FRLQ    FDKK +L Y+K ++K +  KL E     E  K    GA+KF    ++ K  D +F+ GESM  DG +V   Y+E    P  ++    LKE K
Sbjct:   15 SDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANASAEEAAEDLDDGAV--KVNNIVNSFRLQST-TFDKKSYLAYLKGYMKAIKAKLQENGSSAEDIKAFETGASKFVKDTIVPKFKDFEFYTGESMDPDGMVVLLNYREDGVTPYTIFWKHGLKETK 169          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_USTMA (Translationally-controlled tumor protein homolog OS=Ustilago maydis GN=UM01283 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16
Identity = 52/156 (33.33%), Postives = 83/156 (53.21%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 650
            +D +  K +E+ +++EV+   +V    DVDIGANPS               +V++IV +FRLQ    FDKK +L Y+K ++K +  KL+E   +R   F+K      K ++   +D +FF GESM  +G +    Y+E    P  ++  D L+E K
Sbjct:    3 SDGYEMKLVED-VVYEVDAAKIVVSDGDVDIGANPSAEEAAEALENGAE--QVINIVHSFRLQSTQ-FDKKSYLAYLKGYMKSVKAKLAESNPDRVPAFEKGAAAFAKKIVGSFNDWEFFTGESMDPEGMVALLNYREDGVTPYLVFWKDGLRETK 154          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_NEUCR (Translationally-controlled tumor protein homolog OS=Neurospora crassa GN=NCU06464 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16
Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE------ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 650
            +DS+  KE++ GI +EV+   + +GAV VDIGAN S               KV ++V +FRLQ    FDKK +L Y+K ++K +   L E      E ++   K    A   +L+K  D +F+ GESM+ DG +V   Y+E  T P  +     LKE K
Sbjct:   15 SDSYDLKEVD-GIAYEVDCAMIEEGAVQVDIGANASAEEADEALDDGVV--KVNNVVHSFRLQSTQ-FDKKGYLVYLKGYMKSVKNALKEQGKSDEEIKDFETKASAFAKNVILAKFKDWEFYTGESMNPDGMVVLLNYREDGTTPYVVVWKHGLKETK 169          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_KLULA (Translationally-controlled tumor protein homolog OS=Kluyveromyces lactis GN=KLLA0C12716g PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.662e-16
Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = -1
Query:  231 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 650
            +D++  K ++ G+++E +   V  G  ++DIGANPS                V ++V +FRLQ Q AFDKK FLTY+K ++K +  +L E   +   +F+K  +   K ++    D +FF GESM  DG LV   Y+E  T P
Sbjct:   15 SDAYDLKLVD-GVIYEADCDMVKVGGDNIDIGANPSAEDGGDDVEDGTEL--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKEIKGRLQESNPDEVSVFEKGAQAYVKKVIGSFKDWEFFTGESMDPDGMLVLLNYREDGTTP 153          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_YARLI (Translationally-controlled tumor protein homolog OS=Yarrowia lipolytica GN=YALI0E27071g PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.707e-15
Identity = 52/156 (33.33%), Postives = 81/156 (51.92%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 650
            +D+F  K ++N +++EV+   +     DVDIGANPS                V ++V +FRLQ    FDKK +LTY+K ++K +   L+E   E  E F+K  +   K +++   D  F+ GESM  DG +    Y+E  T P  ++    +KE K
Sbjct:   15 SDAFEPKVVDN-VVYEVDCTMIQVAEGDVDIGANPSAEDAEEGVDSDVQT--VNNVVHSFRLQST-GFDKKSYLTYLKGYMKSIKNYLAENKPEEVENFEKGAQAYAKKIVANFKDFDFYTGESMDPDGMVALLNYREDGTTPYLIFWKHGIKEEK 166          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_DANRE (Translationally-controlled tumor protein homolog OS=Danio rerio GN=tpt1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.707e-15
Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEE---RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D +  KE ENG++ EVEGK + +   D+D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E    R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  ++  D L+  KC
Sbjct:   15 SDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDSTSVSG--VDIVLNHKLQET-SYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMIFFKDGLEIEKC 171          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_LABRO (Translationally-controlled tumor protein homolog OS=Labeo rohita GN=tpt1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.803e-15
Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D +  KE ENG++ EVEGK + +   ++D   IG N S                 VDIV   +LQE  ++DKK +  Y+K ++K +  KL E   +R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  L+  D L+  KC
Sbjct:   15 SDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAEVQDEGCESTTVSG--VDIVLNHKLQET-SYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMLFFKDGLEIEKC 171          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.967e-15
Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 650
            +D++  K I+N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   15 SDTYKVKLIDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDAATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPILLCFKHGLEEEK 170          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAE (Translationally-controlled tumor protein homolog OS=Aedes aegypti GN=Tctp PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.967e-15
Identity = 58/159 (36.48%), Postives = 80/159 (50.31%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 650
            +D++  K ++N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   15 SDTYKLKLVDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDNATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPVLLCFKHGLEEEK 170          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_LATJA (Translationally-controlled tumor protein homolog OS=Lateolabrax japonicus GN=tpt1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.487e-15
Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWVVQ--GAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D+F  KE  NGI +EV+GK   +     D  I AN S                 VDIV   +LQE  +FDKK +  Y+K ++K +  KL EE+ E    F  ++    K +L+ L + QFF GE+M+ +G +    Y+E  T P  L+  D L   KC
Sbjct:   15 SDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAEETTDCTDSSVVSG--VDIVLNHKLQET-SFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170          
The following BLAST results are available for this feature:
BLAST of CX047227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_GIBZE2.382e-1736.48Translationally-controlled tumor protein homolog O... [more]
TCTP_USTMA2.633e-1633.33Translationally-controlled tumor protein homolog O... [more]
TCTP_NEUCR4.492e-1635.85Translationally-controlled tumor protein homolog O... [more]
TCTP_KLULA7.662e-1635.66Translationally-controlled tumor protein homolog O... [more]
TCTP_YARLI1.707e-1533.33Translationally-controlled tumor protein homolog O... [more]
TCTP_DANRE1.707e-1533.13Translationally-controlled tumor protein homolog O... [more]
TCTP_LABRO3.803e-1533.13Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAL4.967e-1537.11Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAE4.967e-1536.48Translationally-controlled tumor protein homolog O... [more]
TCTP_LATJA6.487e-1534.59Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12H06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12H06-O11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047227 ID=CX047227; Name=CX047227; organism=Citrus sinensis; type=EST; length=653bp
CTTTCAATCTCAAACCATAAAACCCAATAATTAAGAGCAGAAAAACATAT
TGTTTATGTCAAAATAAAAACTAAAAAACAGCAAGCACAAGTCCCGAGTA
AACCAGCACAAAAGATACATAAAAATAACCGCGGGCAATAATTAAAATTA
GAACTACAGCAGGCACTTCCTCTTCGAAGCCCAGCTTAGCACTTCACCTC
CTTCAATGCATCAGCCATATACAAAAATGTTGGGTCGGTCGCACCTTCCT
TGTAGTAAGCAAAGACAAGACAGCCATCATCATGCATGCTCTCCCCAACA
AAGAATTGAAGGTCACTGAGCTTCGAGAGCAAGAACTTGGTCGCTCCCTC
AATATTCTTCTTAAATATCTCCTGCCTCTCCTCACTCAGCTTGGGCGTCA
GCAACTTGATGAATCTCTTCATGTATGTTAAAAACGGCTTCTTGTCAAAA
GCGGGTTGCTCCTGTAGCCTGAATGTGTCGACAATGTCAACCACCTTCAC
GGCTTGGTCATCAACACCCTCATCCTCATCAGCTCCTTCGGCAGAAGGAT
TTGCACCAATGTCAACATCAACGGCTCCTTGTACAACCCACTTTCCCTCA
ACTTCCCACAGAATCCCATTCTCAATTTCCTTGTAGGGAAAAGAATCGGC
CTC
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