CX047227

Overview
NameCX047227
Unique NameCX047227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_SCHPO (Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe GN=p23fy PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15
Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWV-VQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 650
            +D++  KE+++ I++E + + V V+   DVDIGANPS                V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:   15 SDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_RAT (Translationally-controlled tumor protein OS=Rattus norvegicus GN=Tpt1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14
Identity = 51/159 (32.08%), Postives = 81/159 (50.94%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D +  +EI +G+  EVEGK V   +GA+D  +    +              V  VDIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+  ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   15 SDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_MOUSE (Translationally-controlled tumor protein OS=Mus musculus GN=Tpt1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14
Identity = 51/159 (32.08%), Postives = 81/159 (50.94%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D +  +EI +G+  EVEGK V   +GA+D  +    +              V  VDIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+  ++ QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   15 SDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_ANOGA (Translationally-controlled tumor protein homolog OS=Anopheles gambiae GN=Tctp PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 650
            +D++  K +++ +++EV GK V +   DV + GANPS                 VDIV   RL E    DKK F TY+K ++K L  +L E+     E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   15 SDTYKVKLVDD-VMYEVYGKHVSRTLGDVQLDGANPSAEEAEEGTESATESG--VDIVLNHRLVETGFSDKKQFTTYLKDYMKKLVTRLEEKSPGEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESVPVLLCFKHGLEEEK 170          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14
Identity = 54/161 (33.54%), Postives = 84/161 (52.17%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 650
            AD++  K ++  +++EV GK + +   D+ + GAN S                 VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   15 ADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_CANGA (Translationally-controlled tumor protein homolog OS=Candida glabrata GN=CAGL0L12870g PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.491e-14
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = -1
Query:  192 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEI---FKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 650
            +D++   E++ G+++E +   V  G  ++DIGANPS                V ++V +FRLQ    FDKK FLTY+K ++K +  KL E+  +    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P        + E K
Sbjct:   15 SDAYDINEVD-GVIYEADCAMVKVGGDNIDIGANPSTEDGEDDVEDGTEV--VNNVVHSFRLQPT-GFDKKSFLTYIKGYMKAVKAKLQEKNPDAIPTFEKGAQVYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTPFVAIWKHGIDEEK 166          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_YEAST (Translationally-controlled tumor protein homolog OS=Saccharomyces cerevisiae GN=TMA19 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.172e-14
Identity = 50/143 (34.97%), Postives = 76/143 (53.15%), Query Frame = -1
Query:  231 ADSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 650
            +D++  K +++ +++E +   V  G  ++DIGANPS                V ++V +FRLQ Q AFDKK FLTY+K ++K +  KL E   E    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:   15 SDAYDAKLVDD-VIYEADCAMVNVGGDNIDIGANPSAEGGDDDVEEGAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMX (Translationally-controlled tumor protein homolog OS=Psetta maxima GN=tpt1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.172e-14
Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = -1
Query:  189 FPYKEIENGILWEVEGKWVVQGAV--DVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 641
            +  +E+E GIL EVEGK + +     D   GANPS                 VDI+   +L     ++KK +  Y+K+++K L  KL E   ER + F     GA K +L K  D +F+ GESM+ D  +    Y+E    P  L+  D L+  KC
Sbjct:   18 YKIRELEGGILLEVEGKRITRTEAIDDSAFGANPSAEELSEANEAAVSSG--VDIILNHKLIST-LYNKKQYSAYIKKYMKDLKTKLEETNPERVDAFVAGAVGAVKMILGKFKDFEFYTGESMNHDAMVGLLDYREDGITPIMLFFKDGLEIEKC 170          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_PIG (Translationally-controlled tumor protein OS=Sus scrofa GN=TPT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14
Identity = 52/160 (32.50%), Postives = 80/160 (50.00%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D +  +EI +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of CX047227 vs. ExPASy Swiss-Prot
Match: TCTP_PANTR (Translationally-controlled tumor protein OS=Pan troglodytes GN=TPT1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.367e-14
Identity = 52/160 (32.50%), Postives = 80/160 (50.00%), Query Frame = -1
Query:  189 ADSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 650
            +D +  +EI +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
The following BLAST results are available for this feature:
BLAST of CX047227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_SCHPO8.472e-1533.12Translationally-controlled tumor protein homolog O... [more]
TCTP_RAT3.219e-1432.08Translationally-controlled tumor protein OS=Rattus... [more]
TCTP_MOUSE3.219e-1432.08Translationally-controlled tumor protein OS=Mus mu... [more]
TCTP_ANOGA3.219e-1435.85Translationally-controlled tumor protein homolog O... [more]
TCTP_DROYA5.491e-1433.54Translationally-controlled tumor protein homolog O... [more]
TCTP_CANGA5.491e-1432.05Translationally-controlled tumor protein homolog O... [more]
TCTP_YEAST7.172e-1434.97Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMX7.172e-1433.33Translationally-controlled tumor protein homolog O... [more]
TCTP_PIG9.367e-1432.50Translationally-controlled tumor protein OS=Sus sc... [more]
TCTP_PANTR9.367e-1432.50Translationally-controlled tumor protein OS=Pan tr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12H06_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12H06-O11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047227 ID=CX047227; Name=CX047227; organism=Citrus sinensis; type=EST; length=653bp
CTTTCAATCTCAAACCATAAAACCCAATAATTAAGAGCAGAAAAACATAT
TGTTTATGTCAAAATAAAAACTAAAAAACAGCAAGCACAAGTCCCGAGTA
AACCAGCACAAAAGATACATAAAAATAACCGCGGGCAATAATTAAAATTA
GAACTACAGCAGGCACTTCCTCTTCGAAGCCCAGCTTAGCACTTCACCTC
CTTCAATGCATCAGCCATATACAAAAATGTTGGGTCGGTCGCACCTTCCT
TGTAGTAAGCAAAGACAAGACAGCCATCATCATGCATGCTCTCCCCAACA
AAGAATTGAAGGTCACTGAGCTTCGAGAGCAAGAACTTGGTCGCTCCCTC
AATATTCTTCTTAAATATCTCCTGCCTCTCCTCACTCAGCTTGGGCGTCA
GCAACTTGATGAATCTCTTCATGTATGTTAAAAACGGCTTCTTGTCAAAA
GCGGGTTGCTCCTGTAGCCTGAATGTGTCGACAATGTCAACCACCTTCAC
GGCTTGGTCATCAACACCCTCATCCTCATCAGCTCCTTCGGCAGAAGGAT
TTGCACCAATGTCAACATCAACGGCTCCTTGTACAACCCACTTTCCCTCA
ACTTCCCACAGAATCCCATTCTCAATTTCCTTGTAGGGAAAAGAATCGGC
CTC
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