CX047226

Overview
NameCX047226
Unique NameCX047226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.552e-13
Identity = 53/160 (33.12%), Postives = 83/160 (51.88%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 461
            D++  K ++  +++EV GK + +   D+ + GAN S                 VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   16 DTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_BOVIN (Translationally-controlled tumor protein OS=Bos taurus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.552e-13
Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 461
            D +  +E+ +G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   16 DIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 461
            D++  K +++ +++EV GK + +   D+ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   16 DTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13
Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 461
            D +  +EI  G+  EVEGK V +   ++D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QF++GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:   16 DIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV-DIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_XENTR (Translationally-controlled tumor protein homolog OS=Xenopus tropicalis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 48/158 (30.38%), Postives = 74/158 (46.84%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 461
            D +   E  +G+ +EVEGK +  V+GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++KL+  KL E   +R + F K I+   K +L    + QF+ GE M+ DG +    Y+E    P  ++  D L   KC
Sbjct:   16 DIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASAECQEEDIGGATTVSGVDIVINHKLQET-GFTKDSYKNYIKDYVKLVKAKLEETDPDRVKPFMKGIQDRVKLILGNFKNYQFYTGERMNPDGMVALLDYREDGVTPFMIFFKDGLISEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_PLUXY (Translationally-controlled tumor protein homolog OS=Plutella xylostella GN=Tctp PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVK 458
            D++  K ++  +++EV GK V +   DV I G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ ++FK N+    K +L +  +LQFF GESM  DG +    Y++  G + P  ++    L E K
Sbjct:   16 DTYKMKLVDE-VIYEVTGKLVTRTHGDVQIEGFNPSAEEADEGTDAATESG--VDIVLNHRLMETYAFGDKKSYTLYLKDYMKKLVAKLEETAPDQVDVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMCEYRDINGVSTPVMMFFKHGLLEEK 171          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_CHICK (Translationally-controlled tumor protein homolog OS=Gallus gallus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 50/159 (31.45%), Postives = 77/159 (48.43%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 461
            D +  +E+ NG+  EVEGK V +    +D   IG N S                V DIV    LQE  +F K+ +  Y+K ++K +  +L E + E  K  + GA    K +L+   + QFFVGE+M+ DG +    ++E    P  ++  D L+  KC
Sbjct:   16 DIYKIREVANGLCLEVEGKMVTRTEGQIDDSLIGGNASAEGPEGEGTEATVITGV-DIVINHHLQET-SFTKESYKKYIKDYMKAIKARLEEHKPERVKPFMTGAAEQIKHILANFKNYQFFVGENMNPDGMVALLDFREDGVTPYMIFFKDGLEIEKC 172          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_THEAN (Translationally-controlled tumor protein homolog OS=Theileria annulata GN=TCTP PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = 3
Query:   30 NGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKE 452
            + + +EV+   V +G  D  IG N                  VVD+VD F LQ  P   KK + +Y+K++I+ L   L E   ER E FK ++    K +L+   D +F+VGES+  +  LV+ YYK     P  +++ D L E
Sbjct:   30 SSVAFEVKTSKVAKGEEDYGIGYNDEEGGDQMNVDPNVEV--VVDVVDKFALQSLP-LTKKDYSSYIKKYIQRLVATLQEKNPERVEPFKTSVSEFVKHVLANFDDFEFYVGESLDYEAGLVYGYYKGEEVSPRLVFLKDGLVE 170          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_DEBHA (Translationally-controlled tumor protein homolog OS=Debaryomyces hansenii GN=DEHA2E17468g PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12
Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFLTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF---LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 419
            D++  K +++ +++E +   V     DVDIGANPS                V ++V +FRLQ Q +FDKK F+TYMK ++K +   L+E+  E  +    GA  +   ++S   D  F+ GESM  DG +V   Y+E  T P
Sbjct:   16 DAYDVKLVDD-VVYEADCAMVNVNNGDVDIGANPSAEEGGEDLEDGTET--VNNVVYSFRLQ-QTSFDKKSFMTYMKGYMKRVKAHLAEKNPEAIEAFENGAKTYFKKVVSSFGDWDFYTGESMDPDGMVVLLNYREDGTTP 153          
BLAST of CX047226 vs. ExPASy Swiss-Prot
Match: TCTP_BOMMO (Translationally-controlled tumor protein homolog OS=Bombyx mori GN=Tctp PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 3
Query:    3 DSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKPFLTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 458
            D++  K ++  +++EV G+ V +   D+ I G NPS                 VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ E+FK N+    K +L +  +LQFF GESM  DG +    Y+  +G   P  ++    L+E K
Sbjct:   16 DTYKMKLVDE-VIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDSAVESG--VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 171          
The following BLAST results are available for this feature:
BLAST of CX047226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_DROYA1.552e-1333.13Translationally-controlled tumor protein homolog O... [more]
TCTP_BOVIN1.552e-1332.08Translationally-controlled tumor protein OS=Bos ta... [more]
TCTP_DROME2.647e-1333.13Translationally-controlled tumor protein homolog O... [more]
TCTP_RABIT3.458e-1332.08Translationally-controlled tumor protein OS=Orycto... [more]
TCTP_XENTR4.516e-1330.38Translationally-controlled tumor protein homolog O... [more]
TCTP_PLUXY4.516e-1333.96Translationally-controlled tumor protein homolog O... [more]
TCTP_CHICK4.516e-1331.45Translationally-controlled tumor protein homolog O... [more]
TCTP_THEAN7.703e-1332.64Translationally-controlled tumor protein homolog O... [more]
TCTP_DEBHA1.006e-1234.51Translationally-controlled tumor protein homolog O... [more]
TCTP_BOMMO1.006e-1233.33Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12H06_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12H06-O11-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047226 ID=CX047226; Name=CX047226; organism=Citrus sinensis; type=EST; length=646bp
CCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGTT
GAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAA
TCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCG
TGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGCT
TTTGACAAGAAGCCGTTTTTAACATACATGAAGAGATTCATCAAGTTGCT
GACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTG
AGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTT
GTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAA
GGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAGG
AGGTGAAGTGCTAAGCTGGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCT
AATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTTT
ACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACAA
TATGTTTTTCTGCTCTTAATTATTGGGTTTTATGGTTTGAGATTGA
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