CX047211

Overview
NameCX047211
Unique NameCX047211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57
Identity = 108/135 (80.00%), Postives = 120/135 (88.89%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD  VQSDMK WPFKV+    DKP+I V ++GE K F+ EEISSMVL KMKE+AE+YLG  +
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQV 140          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57
Identity = 110/138 (79.71%), Postives = 121/138 (87.68%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE K F  EEISSMVL KMKEIAEAYLG  ++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57
Identity = 110/134 (82.09%), Postives = 119/134 (88.81%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLG 502
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE K F  EEISSMVL KMKEIAEAYLG
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP VQSDMKLWPF+VI  AG KP ++V+YKGE+K F  EEISSMVL KMKE AEA+LG ++
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAG-KPKVLVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHSV 141          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.401e-57
Identity = 110/138 (79.71%), Postives = 121/138 (87.68%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE K F  EEISSMVL KMKEIAEAYLG  ++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 2.401e-57
Identity = 110/138 (79.71%), Postives = 121/138 (87.68%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP + V YKGE K F  EEISSMVL KMKEIAEAYLG  ++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 221.09 bits (562), Expect = 2.401e-57
Identity = 111/138 (80.43%), Postives = 123/138 (89.13%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP VQSDMKLWPF+VI  AG KP ++V+YKGE+K F  EEISSMVL KMKE AEA+LG  +
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAG-KPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHNV 141          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.136e-57
Identity = 110/136 (80.88%), Postives = 119/136 (87.50%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSDMK WPFKV     DKP+I V Y+GEEK F+ E+ISSMVL KMKE AEAYLG  +K
Sbjct:    6 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVK 141          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 4.096e-57
Identity = 111/135 (82.22%), Postives = 119/135 (88.15%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNPTNTVFDAKRLIGRRF DPSVQSDMK WPF+V    G K  I V YKGE+K FSAEEISSMVL KMKE+AE+YLG T+
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDGAKNQVAMNPTNTVFDAKRLIGRRFDDPSVQSDMKHWPFEV-TQVGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTV 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 5.349e-57
Identity = 110/138 (79.71%), Postives = 121/138 (87.68%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNT+FDAKRLIGRRF D  VQ+DMK WPFKVI+  G +P + V YKGE K F  EEISSMVL KMKEIAEAYLG +I
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGG-RPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSI 139          
The following BLAST results are available for this feature:
BLAST of CX047211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_TRYBB1.838e-5780.00Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP72_RAT1.838e-5779.71Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_HUMAN1.838e-5782.09Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HS71L_RAT1.838e-5780.43Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HSP72_CAPHI2.401e-5779.71Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN2.401e-5779.71Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HS71L_MOUSE2.401e-5780.43Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP70_LEIAM3.136e-5780.88Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_SCHMA4.096e-5782.22Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP7C_ICTPU5.349e-5779.71Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12G10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12G10-M19-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047211 ID=CX047211; Name=CX047211; organism=Citrus sinensis; type=EST; length=516bp
AATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTTCTTTTTT
TATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAAAGGCGAA
GGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTGTCGGTGT
GTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGTAACCGAA
CGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGATCGGTGAC
GCTGCCAAGAACCAGGTCGCCATGAACCCCACCAACACTGTTTTTGATGC
TAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACAGAGTGACA
TGAAACTATGGCCGTTCAAGGTCATTGCTGGAGCAGGTGACAAGCCTATG
ATCGTTGTCAATTACAAAGGCGAAGAGAAGCAATTTTCTGCGGAAGAAAT
CTCCTCAATGGTTCTAAATAAGATGAAGGAGATTGCTGAGGCTTATCTGG
GCACTACTATTAAGAA
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