CX047211

Overview
NameCX047211
Unique NameCX047211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  110 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGA-GDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS VAF   E L+G  AK Q   NP  T+   KR IGR+FS+  V+S++K  P+KV   + GD    V     E+K ++ EEI + +L KMKE AEAYLG T+
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV-----EQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  110 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGA-GDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS VAF   E L+G  AK Q   NP  T+   KR IGR+FS+  V+S++K  P+KV   + GD    V     E+K ++ EEI + +L KMKE AEAYLG T+
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV-----EQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  110 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGA-GDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            IGIDLGTT SCV V +  + ++IA+ +G RTTPS VAF   E L+G  AK Q   NP  T+   KR IGR+FS+  V+S++K  P+KV   + GD    V     E+K ++ EEI + +L KMKE AEAYLG T+
Sbjct:   11 IGIDLGTTNSCVSVMEGGQPKVIASSEGTRTTPSIVAFKGGETLVGIPAKRQAVTNPEKTLASTKRFIGRKFSE--VESEIKTVPYKVAPNSKGDAVFDV-----EQKLYTPEEIGAQILMKMKETAEAYLGETV 138          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_CHLL2 (Chaperone protein dnaK OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 64/138 (46.38%), Postives = 86/138 (62.32%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SCV V Q  +  +I N +GNRTTPS VA T T +RL+G AAK Q   NP NTVF  KR +GR++ +  V ++ KL  + VI   G+        K  +K +S +E+S+M+L KMK+ AE +LG  +
Sbjct:    2 GKIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAVTKTGDRLVGQAAKRQAITNPKNTVFSIKRFMGRKYDE--VPNEKKLASYDVINEGGE-----ARVKINDKIYSPQEVSAMILQKMKQTAEDFLGEKV 132          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_BACTN (Chaperone protein dnaK OS=Bacteroides thetaiotaomicron GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SCV V++ +   +IAN +G RTTPS VAF D  ER +GD AK Q   NPT T+F  KR +G  +    VQ ++   P+KV+ G  + P + +    + + ++ +EIS+M+L KMK+ AE YLG  +
Sbjct:    2 GKIIGIDLGTTNSCVAVFEGNEPVVIANSEGKRTTPSVVAFVDGGERKVGDPAKRQAITNPTRTIFSIKRFMGENWD--QVQKEVTRVPYKVVKGDNNTPRVDI----DGRLYTPQEISAMILQKMKKTAEDYLGQEV 133          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_BACFR (Chaperone protein dnaK OS=Bacteroides fragilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SCV V++ +   +IAN +G RTTPS VAF D  ER +GD AK Q   NPT T+F  KR +G  +    VQ ++   P+KV+ G  + P + +    + + ++ +EIS+M+L KMK+ AE YLG  +
Sbjct:    2 GKIIGIDLGTTNSCVSVFEGNEPVVIANSEGKRTTPSIVAFVDGGERKVGDPAKRQAITNPTRTIFSIKRFMGENWD--QVQKEIARVPYKVVKGDNNTPRVDI----DGRLYTPQEISAMILQKMKKTAEDYLGQEV 133          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_BACFN (Chaperone protein dnaK OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25
Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SCV V++ +   +IAN +G RTTPS VAF D  ER +GD AK Q   NPT T+F  KR +G  +    VQ ++   P+KV+ G  + P + +    + + ++ +EIS+M+L KMK+ AE YLG  +
Sbjct:    2 GKIIGIDLGTTNSCVSVFEGNEPVVIANSEGKRTTPSIVAFVDGGERKVGDPAKRQAITNPTRTIFSIKRFMGENWD--QVQKEIARVPYKVVKGDNNTPRVDI----DGRLYTPQEISAMILQKMKKTAEDYLGQEV 133          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFT (Chaperone protein dnaK OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.051e-25
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS VA+T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K+         +      + K+ + +EIS+ VL KMK+ AE +LG  +
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKV 136          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_XYLFM (Chaperone protein dnaK OS=Xylella fastidiosa (strain M12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.051e-25
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS VA+T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K+         +      + K+ + +EIS+ VL KMK+ AE +LG  +
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKV 136          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: DNAK_XYLF2 (Chaperone protein dnaK OS=Xylella fastidiosa (strain M23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.051e-25
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            G  IGIDLGTT SC+ + +  +  +I N +G+RTTPS VA+T D E L+G AAK Q   NP NT +  KRLIGR+F D  VQ D+ L P+K+         +      + K+ + +EIS+ VL KMK+ AE +LG  +
Sbjct:    2 GKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVAT---ADGKKLAPQEISAKVLEKMKKTAEDFLGEKV 136          
The following BLAST results are available for this feature:
BLAST of CX047211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CHLTB5.399e-2548.15Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA5.399e-2548.15Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT25.399e-2548.15Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLL25.399e-2546.38Chaperone protein dnaK OS=Chlorobium limicola (str... [more]
DNAK_BACTN5.399e-2544.20Chaperone protein dnaK OS=Bacteroides thetaiotaomi... [more]
DNAK_BACFR5.399e-2544.20Chaperone protein dnaK OS=Bacteroides fragilis GN=... [more]
DNAK_BACFN5.399e-2544.20Chaperone protein dnaK OS=Bacteroides fragilis (st... [more]
DNAK_XYLFT7.051e-2544.20Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLFM7.051e-2544.20Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]
DNAK_XYLF27.051e-2544.20Chaperone protein dnaK OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12G10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12G10-M19-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047211 ID=CX047211; Name=CX047211; organism=Citrus sinensis; type=EST; length=516bp
AATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTTCTTTTTT
TATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAAAGGCGAA
GGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTGTCGGTGT
GTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGTAACCGAA
CGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGATCGGTGAC
GCTGCCAAGAACCAGGTCGCCATGAACCCCACCAACACTGTTTTTGATGC
TAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACAGAGTGACA
TGAAACTATGGCCGTTCAAGGTCATTGCTGGAGCAGGTGACAAGCCTATG
ATCGTTGTCAATTACAAAGGCGAAGAGAAGCAATTTTCTGCGGAAGAAAT
CTCCTCAATGGTTCTAAATAAGATGAAGGAGATTGCTGAGGCTTATCTGG
GCACTACTATTAAGAA
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