CX047211

Overview
NameCX047211
Unique NameCX047211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.655e-56
Identity = 110/132 (83.33%), Postives = 117/132 (88.64%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLG 502
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP VQSDMK WPF+VI   GDKP + V+YKGE K F  EEISSMVL KMKEIAEAYLG
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLG 136          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 217.624 bits (553), Expect = 2.655e-56
Identity = 110/132 (83.33%), Postives = 117/132 (88.64%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLG 502
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP VQSDMK WPF+VI   GDKP + V+YKGE K F  EEISSMVL KMKEIAEAYLG
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLG 136          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 3.467e-56
Identity = 109/138 (78.99%), Postives = 117/138 (84.78%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D  VQSDM  WPF VI     +P + V YKGE K F  EE+SSMVL KMKEIAEAYLG T+
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDHVVQSDMNDWPFNVI-NDNTRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTV 139          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 3.467e-56
Identity = 109/132 (82.58%), Postives = 117/132 (88.64%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLG 502
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP VQSDMK WPF+V+   GDKP + V+YKGE K F  EEISSMVL KMKEIAEAYLG
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVV-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLG 136          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 4.528e-56
Identity = 108/135 (80.00%), Postives = 120/135 (88.89%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLG 502
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP VQ+DMKLWPF+VI   G KP ++V+YKGE K F  EEISSMVL K+KE AEA+LG
Sbjct:    5 KGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVI-NEGGKPKVLVSYKGENKAFYPEEISSMVLTKLKETAEAFLG 138          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.528e-56
Identity = 109/132 (82.58%), Postives = 117/132 (88.64%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLG 502
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP VQ+DMK WPF+VI   GDKP + V+YKGE K F  EEISSMVL KMKEIAEAYLG
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQADMKHWPFRVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLG 136          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 5.914e-56
Identity = 105/139 (75.54%), Postives = 121/139 (87.05%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDT+RLIGDAAKNQVAMNP NT+FDAKRLIGR+F D +VQ+DMK WPF+V++  G KP I V YKGE+K F  EE+SSMVL KMKE AEAYLG T++
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG-KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQ 140          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 7.724e-56
Identity = 109/136 (80.15%), Postives = 118/136 (86.76%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAG-DKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            +IGIDLGTTYSCVGVW +DRVEIIANDQGNRTTPSYVAF DTERLIGDAAKNQVAMNP NTVFDAKRLIGR+FSD  VQSDMK WPFKVI     DKP+I V++KGE K FS EEISSMVL+KMKE AE+YLG  +
Sbjct:    3 SIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISSMVLSKMKETAESYLGKPV 138          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.009e-55
Identity = 107/138 (77.54%), Postives = 119/138 (86.23%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT T+FDAKRLIGR+F D +VQSDMK WPF+V++  G KP I V YK E+K F  EEISSMVL KMKE AEAYLG T+
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADG-KPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTV 139          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.009e-55
Identity = 107/136 (78.68%), Postives = 118/136 (86.76%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+F DP +Q+DMK WPF V+   G KP I V +KGE K F+ EEISSMVL KMKE AEAYLG ++K
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVV-NDGGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVK 138          
The following BLAST results are available for this feature:
BLAST of CX047211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_PONAB2.655e-5683.33Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN2.655e-5683.33Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP7C_ORYLA3.467e-5678.99Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP71_CANFA3.467e-5682.58Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71L_HUMAN4.528e-5680.00Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HS71B_PIG4.528e-5682.58Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP7D_MANSE5.914e-5675.54Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HS7C3_DICDI7.724e-5680.15Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP7D_DROME1.009e-5577.54Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP74_ANOAL1.009e-5578.68Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12G10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12G10-M19-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047211 ID=CX047211; Name=CX047211; organism=Citrus sinensis; type=EST; length=516bp
AATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTTCTTTTTT
TATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAAAGGCGAA
GGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTGTCGGTGT
GTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGTAACCGAA
CGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGATCGGTGAC
GCTGCCAAGAACCAGGTCGCCATGAACCCCACCAACACTGTTTTTGATGC
TAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACAGAGTGACA
TGAAACTATGGCCGTTCAAGGTCATTGCTGGAGCAGGTGACAAGCCTATG
ATCGTTGTCAATTACAAAGGCGAAGAGAAGCAATTTTCTGCGGAAGAAAT
CTCCTCAATGGTTCTAAATAAGATGAAGGAGATTGCTGAGGCTTATCTGG
GCACTACTATTAAGAA
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