CX047211

Overview
NameCX047211
Unique NameCX047211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.006e-55
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGD+AKNQVAMNP NTVFDAKRLIGR+F+D  VQSD+K +PF V    G KP I V Y+GE+K+FS EEISSM+L KMKE+AE+YLG T+
Sbjct:    4 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQVAMNPHNTVFDAKRLIGRKFADAEVQSDIKHFPFTVF-DKGGKPYIRVQYRGEDKEFSPEEISSMILTKMKEVAESYLGGTV 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.006e-55
Identity = 104/136 (76.47%), Postives = 122/136 (89.71%), Query Frame = 2
Query:  104 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            PA+GIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ+DMK +PFKV+  +G KP++ V +KGEEKQF+ EEISSMVL KM+E AEAYLG T+
Sbjct:    3 PAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVEKSG-KPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTV 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.539e-55
Identity = 106/137 (77.37%), Postives = 118/137 (86.13%), Query Frame = 2
Query:  101 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            GPAIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNT+FDAKRLIGRRF+D S+Q+DMK WPF+VI   G KPM+   Y GE K  S EE+SSMVL KMKE AEAYLG  +
Sbjct:    4 GPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFNDSSIQADMKHWPFRVINKDG-KPMLQAEYMGETKTLSPEEVSSMVLTKMKETAEAYLGKKV 139          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.539e-55
Identity = 105/136 (77.21%), Postives = 120/136 (88.24%), Query Frame = 2
Query:  104 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            PA+GIDLGTTYSCVGV++ DR++IIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQ+DMK WPFKV+  +G KP+I V +KGE KQF+ EEISSMVL KM+E AEA+LG T+
Sbjct:    3 PAVGIDLGTTYSCVGVFRDDRIDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFGDAEVQADMKHWPFKVVDKSG-KPIIEVEFKGETKQFTPEEISSMVLTKMRETAEAFLGGTV 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 8.540e-55
Identity = 108/137 (78.83%), Postives = 117/137 (85.40%), Query Frame = 2
Query:  104 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            PAIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N+VFDAKRLIGRRF D  +Q D+K WPFKVI   G KP I V +KG  K FS EEISSMVL KMKE AEAYLGTT+K
Sbjct:    2 PAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNG-KPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVK 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.115e-54
Identity = 107/138 (77.54%), Postives = 115/138 (83.33%), Query Frame = 2
Query:   98 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTV DA RL GR+F D  VQSDMK WPF VI     +P + V YKGE K F  EEISSMVL KMKEIAEAYLG T+
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVLDANRLNGRQFDDGVVQSDMKHWPFNVI-NDNSRPKVQVEYKGESKSFYPEEISSMVLTKMKEIAEAYLGKTV 139          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.115e-54
Identity = 104/136 (76.47%), Postives = 120/136 (88.24%), Query Frame = 2
Query:  104 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            PA+GIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP VQ+DMK +PFK I   G KP+I V +KGE K+F+ EEISSMVL KM+E AEAYLG T+
Sbjct:    3 PAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIGRKFADPEVQADMKHFPFK-ITDKGGKPVIQVEFKGETKEFTPEEISSMVLTKMRETAEAYLGGTV 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 1.457e-54
Identity = 105/136 (77.21%), Postives = 119/136 (87.50%), Query Frame = 2
Query:  104 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            PA+GIDLGTTYSCVGV++ DR EIIANDQGNRTTPS+VAFTDTERL+GDAAKNQVAMNP NTVFDAKRLIGR+FSDP VQ+DMK +PFKVI   G KP+I V +KGE K F+ EEIS+M+L KMKE AEAYLG T+
Sbjct:    3 PAVGIDLGTTYSCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAKRLIGRKFSDPEVQADMKHFPFKVI-DRGGKPVIQVEFKGETKVFTPEEISAMILQKMKETAEAYLGGTV 137          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.902e-54
Identity = 102/136 (75.00%), Postives = 121/136 (88.97%), Query Frame = 2
Query:  107 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 514
            AIGIDLGTTYSCVGV+QH RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+DP+VQSD+K WPF+V++  G KP + V+Y+GE+K F  EEISSMVL+KMKE AEAYLG  ++
Sbjct:    8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVR 142          
BLAST of CX047211 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 1.902e-54
Identity = 105/136 (77.21%), Postives = 116/136 (85.29%), Query Frame = 2
Query:  104 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 511
            PAIGIDLGTTYSCVGV+QH  VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP +  D+K WPFKV++  G KP I V YKGE K+F+ EEISSMVL KMKE AEAYLG +I
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGEVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDIKHWPFKVVSDGG-KPKIGVEYKGESKRFAPEEISSMVLVKMKETAEAYLGESI 136          
The following BLAST results are available for this feature:
BLAST of CX047211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_PUCGR5.006e-5578.52Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_TRIRU5.006e-5576.47Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP74_PARLI6.539e-5577.37Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP70_EMENI6.539e-5577.21Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP68_DROME8.540e-5578.83Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP7C_DANRE1.115e-5477.54Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP70_AJECA1.115e-5476.47Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_NEUCR1.457e-5477.21Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP76_PIG1.902e-5475.00Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP71_DROSI1.902e-5477.21Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS09_12G10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12G10-M19-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047211 ID=CX047211; Name=CX047211; organism=Citrus sinensis; type=EST; length=516bp
AATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTTCTTTTTT
TATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAAAGGCGAA
GGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTGTCGGTGT
GTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGTAACCGAA
CGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGATCGGTGAC
GCTGCCAAGAACCAGGTCGCCATGAACCCCACCAACACTGTTTTTGATGC
TAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACAGAGTGACA
TGAAACTATGGCCGTTCAAGGTCATTGCTGGAGCAGGTGACAAGCCTATG
ATCGTTGTCAATTACAAAGGCGAAGAGAAGCAATTTTCTGCGGAAGAAAT
CTCCTCAATGGTTCTAAATAAGATGAAGGAGATTGCTGAGGCTTATCTGG
GCACTACTATTAAGAA
back to top