CX047198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_FUSNN (Triosephosphate isomerase OS=Fusobacterium nucleatum subsp. nucleatum GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11 Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 R+ + GNWK ++E + ++ L + VK + S+ +AA+N + + GA+TGEVS +ML ++ + +VILGHSERR ES++F+ KV L Sbjct: 2 RRLVIAGNWKMYKNNKEAVETLTQLKDLTRDVKNVDIVIGAPFTCLSDAVKIVEGSNVKIAAENVYPKIEGAYTGEVSPKMLKDIGVTYVILGHSERREYFKESDEFINQKVKAVL 117
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11 Identity = 46/121 (38.02%), Postives = 60/121 (49.59%), Query Frame = -2 Query: 2 RKFFVGGNWKCN----GTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 RK FV GNWK N G +I+ L +EA +S ++ +AAQNC+ GA+TGE+SA ML N +VILGHSERR NE+++ V KV AL Sbjct: 2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIK----LAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_BACV8 (Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11 Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 RK V GNWK N +E + LNEA V ++ ++ V A+NC + GA+TGEVSAEM+ + +VILGHSERRA +E+ + + +KV AL Sbjct: 2 RKNIVAGNWKMNKNLQEGIALAKELNEALAADKPNCDVVICTPFIHLASVTPIVDKAVIGVGAENCADKVSGAYTGEVSAEMVASTGAEYVILGHSERRAYYHETVEILEEKVKLAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_YERE8 (Triosephosphate isomerase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = -2 Query: 17 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 337 V GNWK NG++ V ++++ L + L S + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++F+ K Sbjct: 6 VMGNWKLNGSTHMVNELIANLRKELSTVEGCGVAIAPPAIYLNQAKHELSGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDEFIAKK 112
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_THICR (Triosephosphate isomerase OS=Thiomicrospira crunogena (strain XCL-2) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRK-GGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 R+ FV GNWK +G +K +V+ LN L+ + + QN + GA+TGE SA ML ++ +VILGHSERRA+ E++ + KV AL Sbjct: 2 RQLFVAGNWKMHGDKASIKTLVTGLNAKADSVGDVLVAVCPPAIYLDYTKNCLMAGEIALGGQNMAIEPVQGAYTGETSASMLKDVGCQYVILGHSERRAIYGETDQDIAAKVKTAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_STRPD (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+RK + GNWK N +E K V + ++S S VAAQNC+ GAFTGE S ++L + +V++GHSERR +E+++ + K Sbjct: 1 MSRKPIIAGNWKMNKNPQEAKAFVEAVASKLPSTDLVDVAVAAPAVDLVTTIESAKDSVLKVAAQNCYFENTGAFTGETSPKVLAEMGADYVVIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_MYCMO (Triosephosphate isomerase OS=Mycoplasma mobile GN=tpiA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLR----SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 RK + GNWK N T E + V N+ + + ++ +AAQN GAFTGE+SAEML++L + V+LGHSERR +E+++ V K+ A+ Sbjct: 2 RKKIIIGNWKMNKTKTEAENFVKEFNKITSELNLKLDKNLVAGLALPFTSLGIKKEGNFANLVIAAQNFHQNNSGAFTGEISAEMLLDLGVKMVVLGHSERREFFHETDEIVNMKMHQAI 121
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_GRABC (Triosephosphate isomerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = -2 Query: 5 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYA 337 + GNWK NG + ++ L +A S+L S V AQ+C + + GA TG++SAEMLV WVILGHSERR E ++ V +KV A Sbjct: 5 IAGNWKMNGLRSTSESLLQALRDAAPHALRNCDMLICPPATLIAQAASVLAGSGIEVGAQDCHMARSGAHTGDLSAEMLVEAGAHWVILGHSERRRDHGELSETVREKVIAA 116
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = -2 Query: 2 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 352 AR+ F+GGN+KCNG+ + +K V+ + A + + +AAQN ++ GA+TGE S EML ++ + VI+GHSERR ++ E+++ K AL Sbjct: 3 ARRPFIGGNFKCNGSLDFIKSHVAAI-AAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_STRTD (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+RK F+ GNWK N EE K V + + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKK 113 The following BLAST results are available for this feature:
BLAST of CX047198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047198 ID=CX047198; Name=CX047198; organism=Citrus sinensis; type=EST; length=386bpback to top |