CX047198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_STRT2 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tpiA PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+RK F+ GNWK N EE K V + + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_STRT1 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 36/113 (31.86%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+RK F+ GNWK N EE K V + + + S+ VAAQN + GAFTGE S ++L + +V++GHSERR +E+++ + K Sbjct: 1 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSADLVEAGIAVPAVDLTTVIAAAKGSNLKVAAQNTYFENSGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_RHOBA (Triosephosphate isomerase OS=Rhodopirellula baltica GN=tpiA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 37/118 (31.36%), Postives = 59/118 (50.00%), Query Frame = -2 Query: 2 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 355 M+R+ + GNWK N +E + + +A +++ + + AQN + + GAFTGEV+A ML ++ +VILGHSERR L+ E++ V K+ AL Sbjct: 1 MSRRILIAGNWKMNMRAESGASLAKGIVDAVGKSPAVEVVLCPPSVYLSGVADAVVGTPVELGAQNLYAAEDGAFTGEVNASMLTDVGCRFVILGHSERRQLMGETDACVAKKLHAAL 118
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_LACDL (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. lactis GN=tpiA PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 34/113 (30.09%), Postives = 56/113 (49.56%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+R + GNWK N +E + V+ + + +K+ S+ HV A+NC+ GAFTGE S +L + + +VI+GHSERR +E+++ + K Sbjct: 1 MSRTPIIAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGSNLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_LACDE (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=tpiA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 34/113 (30.09%), Postives = 56/113 (49.56%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+R + GNWK N +E + V+ + + +K+ S+ HV A+NC+ GAFTGE S +L + + +VI+GHSERR +E+++ + K Sbjct: 1 MSRTPIIAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGSNLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_LACDB (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 34/113 (30.09%), Postives = 56/113 (49.56%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+R + GNWK N +E + V+ + + +K+ S+ HV A+NC+ GAFTGE S +L + + +VI+GHSERR +E+++ + K Sbjct: 1 MSRTPIIAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGSNLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_LACDA (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=tpiA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 34/113 (30.09%), Postives = 56/113 (49.56%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M+R + GNWK N +E + V+ + + +K+ S+ HV A+NC+ GAFTGE S +L + + +VI+GHSERR +E+++ + K Sbjct: 1 MSRTPIIAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGSNLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKK 113
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPU (Triosephosphate isomerase OS=Mycoplasma pulmonis GN=tpiA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = -2 Query: 2 RKFFVGGNWKCNGTSEEVKKIVST------LNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYAL 349 +K + GNWK N T +E + ++ LN A+ + L +++ ++ AQN + GAFTGE+SA+ML +++ +VI+GHSERR E+N V K A+ Sbjct: 2 KKLLIIGNWKMNKTYDEARDFINAFSNAYALNGAKISENIEYGIAPSFTNMSLFNKELLEKTNINLVAQNINENRSGAFTGEISAQMLKSINAKYVIVGHSERRQNYRETNKIVNQKAKAAI 123
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_ERWCT (Triosephosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=tpiA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = -2 Query: 17 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 337 V GNWK NG++ V ++++ L + L S + AQN V GAFTGE SAEML ++ ++I+GHSERR ES++F+ K Sbjct: 6 VMGNWKLNGSTNLVNELIAGLRKELSTVDGCGVAIAPPAIYLDQANHQLAGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKK 112
BLAST of CX047198 vs. ExPASy Swiss-Prot
Match: TPIS_WIGBR (Triosephosphate isomerase OS=Wigglesworthia glossinidia brevipalpis GN=tpiA PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 42/113 (37.17%), Postives = 54/113 (47.79%), Query Frame = -2 Query: 17 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXVKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDK 355 M K + NWK NG VKKI+ LNE K +L+ + +AAQN V G+FTGE+S ML + +VI+GHSERR NES + V K Sbjct: 1 MKLKPLILSNWKLNGNCLLVKKILLKLNEKLKNKNNLKVVIAPPVIYLSEFKKYVLKKNIFLAAQNVDVNLTGSFTGEISPIMLYEFGVKYVIIGHSERRLYHNESIEDVTKK 113 The following BLAST results are available for this feature:
BLAST of CX047198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047198 ID=CX047198; Name=CX047198; organism=Citrus sinensis; type=EST; length=386bpback to top |