CX047115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.223e-47 Identity = 101/167 (60.48%), Postives = 125/167 (74.85%), Query Frame = -2 Query: 377 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQ 865 IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT ESF NVK+WL+EI++ ++V ++LVGNK D KVV E A FA ++GI ETSAK NVE+ F + + K+ +A Q Sbjct: 14 IGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.223e-47 Identity = 101/167 (60.48%), Postives = 125/167 (74.85%), Query Frame = -2 Query: 377 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQ 865 IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT ESF NVK+WL+EI++ ++V ++LVGNK D KVV E A FA ++GI ETSAK NVE+ F + + K+ +A Q Sbjct: 14 IGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.724e-47 Identity = 95/189 (50.26%), Postives = 130/189 (68.78%), Query Frame = -2 Query: 302 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-KNRMASQPASNNARPPTVQIRGQPVNQKSGCC 865 IGDSGVGK+C+L RF+DD++ ++ISTI +DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID++A+E+V ++L+ NKCD+ +VV + A E I F ETSAK+ N+E+AF+ + I + +P S N + G KS CC Sbjct: 15 IGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.558e-47 Identity = 96/189 (50.79%), Postives = 127/189 (67.20%), Query Frame = -2 Query: 302 IGDSGVGKSCLLLRFAD-DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 865 IGDS VGK+ LLLRF D +++ E+ ++ VD+K + + DG+T LQIWDTAGQERFRTITSS+YRGAHG++V YDVTDQ ++NNV W+ EI RY V+++LVGNKCDL K+V+ A+ +AD +GIPF+ETSA + NVE+AFMAMA I + +P + G P K C Sbjct: 12 IGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPSVVKP----VCGSPPRTKKNIC 196
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 6.069e-47 Identity = 86/171 (50.29%), Postives = 125/171 (73.10%), Query Frame = -2 Query: 356 IGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 865 +GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + ++ DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T +VV E + A E G+PFMETSAKS NV+ AF A+A +K R P+ R Sbjct: 70 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFR 240
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 7.926e-47 Identity = 91/192 (47.40%), Postives = 133/192 (69.27%), Query Frame = -2 Query: 299 IGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQK--SGCCS 865 +GDSGVGK+C L++F D ++L ++I+T+G+D + + V DG +KLQIWDTAGQERFR++T +YYR A ++++YD+T+Q SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+PFMETSAK+ NVE AF+A+A +K R QP P+ QIR +QK S CCS Sbjct: 35 LGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQPDE-----PSFQIRDYVESQKKRSSCCS 221
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.926e-47 Identity = 85/171 (49.71%), Postives = 127/171 (74.27%), Query Frame = -2 Query: 356 IGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 865 +GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + ++ DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T ++VV E + A E G+PFMETSA++ NV+ AF A+A +K R A P+ R Sbjct: 73 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFR 243
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 186.037 bits (471), Expect = 2.306e-46 Identity = 89/192 (46.35%), Postives = 135/192 (70.31%), Query Frame = -2 Query: 299 IGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQK--SGCCS 865 +GD+GVGK+C L++F D ++L ++I+T+G+DF+ + V DG +KLQIWDTAGQERFR++T +YYR A ++++YD+T++ SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+PF+ETSAK+ NVE AF+A+A +K R A + A P+ QIR +QK S CCS Sbjct: 35 LGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYR-----AGHQADEPSFQIRDYVESQKKRSSCCS 221
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.550e-45 Identity = 89/170 (52.35%), Postives = 122/170 (71.76%), Query Frame = -2 Query: 353 GDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARP 862 GDSGVGK+ +L R DD++ E++I TIG++FKI+TV +GK IKLQIWDTAG++RFR + +S+YRG HG+I+VYDVTDQ SF NV W+ +I RYA+ENV K+++GNK DL + KVV A+ FAD + IPF E SAK + N+E+AF+++ NR+ P Sbjct: 15 GDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRIEETSLKKTQSP 182
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.550e-45 Identity = 80/161 (49.69%), Postives = 121/161 (75.16%), Query Frame = -2 Query: 383 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YDVT+++SFN+V+ W+ +I Y+ +N +LVGNKCD+ +V+S+E + AD++G+ F ETSAK NV+ F + I ++M+ Sbjct: 27 IGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMS 187 The following BLAST results are available for this feature:
BLAST of CX047115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047115 ID=CX047115; Name=CX047115; organism=Citrus sinensis; type=EST; length=866bpback to top |