CX047115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.330e-45 Identity = 88/196 (44.90%), Postives = 130/196 (66.33%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQ---------PVNQKSGC 865 IG+S VGK+ L R+ DDS+ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W +I Y+ EN +LVGNKCD+ + +VVS + + AD++G+ F ETSAK NV+ F + I ++M A + + P Q +GQ P Q+ C Sbjct: 28 IGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKM----AESLDKDPQQQPKGQKLEANPTQKPAQQQCNC 219
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/193 (46.11%), Postives = 128/193 (66.32%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 28 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/193 (46.11%), Postives = 128/193 (66.32%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 28 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/193 (46.11%), Postives = 128/193 (66.32%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 28 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/193 (46.11%), Postives = 128/193 (66.32%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 28 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/193 (46.11%), Postives = 128/193 (66.32%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 28 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/193 (46.11%), Postives = 128/193 (66.32%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 865 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 28 IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 84/171 (49.12%), Postives = 122/171 (71.35%), Query Frame = -2 Query: 356 IGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 865 +GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + ++ DG +KLQ+WDTAGQERFR++T +YYR AH ++++YDVT++ SF+N++ WL EI YA +V +L+GNK D +VV E + A E G+PFMETSAK+ NV+ AF A+A +K R P+ R Sbjct: 69 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFR 239
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.653e-44 Identity = 91/197 (46.19%), Postives = 131/197 (66.50%), Query Frame = -2 Query: 296 IGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNN--ARPPTVQIRGQPVNQKSGCCST 865 IGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV++WL E+ +A N+ ++ GNK DL + VS E +A A++ G+ F+ETSA A N+E+AF + I K +A+Q AS+N + T+ + NQ+ CCST Sbjct: 18 IGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRSCCST 214
BLAST of CX047115 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.158e-44 Identity = 82/166 (49.40%), Postives = 122/166 (73.49%), Query Frame = -2 Query: 371 IGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPA 865 +GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + V+ DG +KLQIWDTAGQERFR++T +YYR AH ++++YDVT++ SF++++ WL EI +A ++V +L+GNK D + V E A+ A + G+PFMETSAK+ NV+ AF A+A +K R P+ Sbjct: 69 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS 234 The following BLAST results are available for this feature:
BLAST of CX047115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047115 ID=CX047115; Name=CX047115; organism=Citrus sinensis; type=EST; length=866bpback to top |