CX047100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_SOYBN (50S ribosomal protein L16, chloroplastic OS=Glycine max GN=rpl16 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.827e-43 Identity = 81/86 (94.19%), Postives = 86/86 (100.00%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +P+RTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAM+RNVRRGG+IWVRIFPDKPVT+RPTETRMGSGKG Sbjct: 3 SPQRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_LIRTU (50S ribosomal protein L16, chloroplastic OS=Liriodendron tulipifera GN=rpl16 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.998e-43 Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 3 Query: 576 PKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 PKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTR RRGGKIWVRIFPDKPVT+RPTETRMGSGKG Sbjct: 2 PKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTVRPTETRMGSGKG 86
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_GOSHI (50S ribosomal protein L16, chloroplastic OS=Gossypium hirsutum GN=rpl16 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.998e-43 Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKR RFRKQHRGRMKGISYRGN ICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVT+RPTETRMGSGKG Sbjct: 3 SPKRNRFRKQHRGRMKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPTETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_CHLSC (50S ribosomal protein L16, chloroplastic OS=Chloranthus spicatus GN=rpl16 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.998e-43 Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 NPKRTRFRKQHRGRMKGISYRGN+ICFGRYALQALEPAWITSRQIEAGRRAMTR RRGGKIWVRIFPDKPVT+RPTETRMGSGKG Sbjct: 4 NPKRTRFRKQHRGRMKGISYRGNNICFGRYALQALEPAWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPTETRMGSGKG 89
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_CARPA (50S ribosomal protein L16, chloroplastic OS=Carica papaya GN=rpl16 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.998e-43 Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKRTRFRKQHRGR+KGISYRGN ICFGRYALQALEP WITSRQIEAGRRAMTRN+RRGGKIWVRIFPDKPVTLRPTETRMGSGKG Sbjct: 3 SPKRTRFRKQHRGRLKGISYRGNRICFGRYALQALEPTWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_CALFG (50S ribosomal protein L16, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl16 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.525e-43 Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEP+WITSRQIEAGRRAMTR RRGGKIWVRIFPDKPVT+RPTETRMGSGKG Sbjct: 3 SPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPSWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTVRPTETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_MANES (50S ribosomal protein L16, chloroplastic OS=Manihot esculenta GN=rpl16 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.113e-42 Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKRTRFRKQHRGRMKGI++RGN ICFGRYALQALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRPTETRMGSGKG Sbjct: 3 SPKRTRFRKQHRGRMKGIAFRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_SPIOL (50S ribosomal protein L16, chloroplastic OS=Spinacia oleracea GN=rpl16 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.454e-42 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKRTRFRKQHRGRMKGISYRGN ICFGRYALQALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKG Sbjct: 3 SPKRTRFRKQHRGRMKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_CUSEX (50S ribosomal protein L16, plastid OS=Cuscuta exaltata GN=rpl16 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.454e-42 Identity = 79/86 (91.86%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKRTRFRKQHRG++KGISYRGNHICFGRYALQALEPAW+TSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKG Sbjct: 3 SPKRTRFRKQHRGKLKGISYRGNHICFGRYALQALEPAWLTSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKG 88
BLAST of CX047100 vs. ExPASy Swiss-Prot
Match: RK16_CUCSA (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus GN=rpl16 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.454e-42 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 573 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKG 830 +PKRTRFRK HRGRMKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRPTETRMGSGKG Sbjct: 3 SPKRTRFRKHHRGRMKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKG 88 The following BLAST results are available for this feature:
BLAST of CX047100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047100 ID=CX047100; Name=CX047100; organism=Citrus sinensis; type=EST; length=830bpback to top |