CX047034

Overview
NameCX047034
Unique NameCX047034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3873 contig Csv1_Contig3873:9..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50
Identity = 100/225 (44.44%), Postives = 148/225 (65.78%), Query Frame = -2
Query:  180 QKGIIVRVEEELRVLSP-----------QRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSP 818
            Q+G I+ V+  L++L P           Q               S  NG+EE  CT+K++ NI +PS AD+YNPR GR+T+VN    PIL  IQ+SA + NLYQNA+++P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ LK NR +E   F+P
Sbjct:  255 QRGEIIHVKNGLQLLKPTLTQQQEQAQAQDQYQQVQYSERQQTSSRWNGLEENFCTIKVRVNIENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEEHGAFTP 479          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: GLUB2_ORYSJ (Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.056e-49
Identity = 99/223 (44.39%), Postives = 147/223 (65.92%), Query Frame = -2
Query:  180 QKGIIVRVEEELRVLSP---------QRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSP 818
            Q+G IV V+  L++L P         Q               S  NG+EE  CT+K + NI +PS AD+YNPR GR+++VN    PIL  IQ+SA + NLYQNA+++P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ +K NR +E   F+P
Sbjct:  253 QRGEIVHVKNGLQLLKPTLTQQQEQAQAQYQEVQYSEQQQTSSRWNGLEENFCTIKARVNIENPSRADSYNPRAGRISSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGQSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEEHGAFTP 475          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49
Identity = 85/178 (47.75%), Postives = 132/178 (74.16%), Query Frame = -2
Query:  180 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSP 710
            NG+EE  C+++ + NI +P  AD YNPR GR+T +N  N P L  +Q+SA + NLYQNA+++P+WN+NAHSV+++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKTN  +M SQ+AG+ S++R LP+DV+ N++++SR EAQ LK NR +E   F+P
Sbjct:  317 NGLEENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTNPNSMVSQIAGKTSILRALPVDVLANAYRISRQEAQNLKNNRGEEFDAFTP 494          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: CRU2_BRANA (Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49
Identity = 91/182 (50.00%), Postives = 135/182 (74.18%), Query Frame = -2
Query:  168 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FSPGPRS 710
            NG+EETIC+ +   N++DPS AD Y P+ G ++ +N ++LPILR ++LSA +G++ QNAM+ P W   +++V+Y+T G  ++Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA++    WI FKTN  A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  S GP S
Sbjct:  306 NGLEETICSARCTDNLDDPSNADVYKPQLGYISILNSYDLPILRVLRLSALRGSIRQNAMVLPQWKSKSNAVLYVTDGEAQIQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSDQFRWIEFKTNANAQINTLAGRTSVMRGLPLEVIANGYQISLEEARRVKFNTIETTLTHSSGPAS 487          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.513e-47
Identity = 82/178 (46.07%), Postives = 130/178 (73.03%), Query Frame = -2
Query:  180 NGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSP 710
            NG+EE  C+++ + NI +P  AD YNPR GR+T +N  N P L  +Q+SA + NLYQNA+++P+WN+NAHSV+++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKT   +M S +AG+ S++R LP+DV+ N++++SR E+Q LK NR +E   F+P
Sbjct:  317 NGLEENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTTPNSMVSYIAGKTSILRALPVDVLANAYRISRQESQNLKNNRGEEFGAFTP 494          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: 11S2_SESIN (11S globulin seed storage protein 2 OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.287e-47
Identity = 92/217 (42.40%), Postives = 136/217 (62.67%), Query Frame = -2
Query:  171 QKGIIVRVEEELRVLSPQRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSPGPR 818
            ++G+IV   E +  + P                  DNG+EET CTMK + N+     AD ++ + GRV  V+R  LPIL+Y+ LSAEKGNLY NA+++P W++  H++VY+TRG+ ++Q+V  NG+ + + ++ +G++ VVPQ +    RA N G EW++FKT    M S LAG  SVIR +PL VI NS+Q+S ++AQ LK NR  +  + SPG R
Sbjct:  245 ERGLIVMARERMTFVRPDEEEGEQEHRGRQL----DNGLEETFCTMKFRTNVESRREADIFSRQAGRVHVVDRNKLPILKYMDLSAEKGNLYSNALVSPDWSMTGHTIVYVTRGDAQVQVVDHNGQALMNDRVNQGEMFVVPQYYTSTARAGNNGFEWVAFKTTGSPMRSPLAGYTSVIRAMPLQVITNSYQISPNQAQALKMNRGSQSFLLSPGGR 457          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: LEGA_PEA (Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.072e-45
Identity = 83/170 (48.82%), Postives = 122/170 (71.76%), Query Frame = -2
Query:  207 GDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYN 716
            GDNG+EET+CT KL+ NI   S  D YNP  GR+ TV   +LP+LR+++LSAE G+L++NAM  PH+NLNA+S++Y  +G  R+Q+V  NG  VFDG++  G+ + VPQ +AV  ++ +    +++FKTND A  ++LAG +SVI  LPLDV+  +F + R+EA++LK N
Sbjct:  330 GDNGLEETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSN 499          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: LEGA2_PEA (Legumin A2 OS=Pisum sativum GN=LEGA2 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.072e-45
Identity = 83/170 (48.82%), Postives = 122/170 (71.76%), Query Frame = -2
Query:  207 GDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYN 716
            GDNG+EET+CT KL+ NI   S  D YNP  GR+ TV   +LP+LR+++LSAE G+L++NAM  PH+NLNA+S++Y  +G  R+Q+V  NG  VFDG++  G+ + VPQ +AV  ++ +    +++FKTND A  ++LAG +SVI  LPLDV+  +F + R+EA++LK N
Sbjct:  333 GDNGLEETVCTAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAFKTNDRAGIARLAGTSSVINNLPLDVVAATFNLQRNEARQLKSN 502          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: LEGB7_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.240e-45
Identity = 95/217 (43.78%), Postives = 135/217 (62.21%), Query Frame = -2
Query:  165 IVRVEEELRVLSP--QRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFSPGPRSQ 806
            IVRVE  LR+++P  Q+               G NG+EETIC++K++ NI  P+ AD YNPR G ++T N   LPILRY++LSAE   LY+N + APHWN+NA+S++Y+ RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++A    GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  120 IVRVEGGLRIINPEGQQEEEEQEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPHSQSQ 333          
BLAST of CX047034 vs. ExPASy Swiss-Prot
Match: LEGB6_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.240e-45
Identity = 95/217 (43.78%), Postives = 135/217 (62.21%), Query Frame = -2
Query:  165 IVRVEEELRVLSP--QRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRA-SNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFSPGPRSQ 806
            IVRVE  LR+++P  Q+               G NG+EETIC++K++ NI  P+ AD YNPR G ++T N   LPILRY++LSAE   LY+N + APHWN+NA+S++Y+ RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++A    GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  114 IVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPQSQSQ 327          
The following BLAST results are available for this feature:
BLAST of CX047034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLUB1_ORYSJ7.066e-5044.44Glutelin type-B 1 OS=Oryza sativa subsp. japonica ... [more]
GLUB2_ORYSJ2.056e-4944.39Glutelin type-B 2 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA3.507e-4947.7512S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]
CRU2_BRANA3.507e-4950.00Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=... [more]
SSG1_AVESA2.513e-4746.0712S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
11S2_SESIN4.287e-4742.4011S globulin seed storage protein 2 OS=Sesamum ind... [more]
LEGA_PEA3.072e-4548.82Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1[more]
LEGA2_PEA3.072e-4548.82Legumin A2 OS=Pisum sativum GN=LEGA2 PE=3 SV=1[more]
LEGB7_VICFA5.240e-4543.78Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE... [more]
LEGB6_VICFA5.240e-4543.78Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11G04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11G04-N8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047034 ID=CX047034; Name=CX047034; organism=Citrus sinensis; type=EST; length=822bp
TTTTTTTTTACGGCAAAAACATTTAGTTTTCTTATTTCACCAGAACAAAA
CTTACAGCAGCAGTACACTTTCGAGCCAACAGCAAGGACTTTATTCCTTA
TGTACATACACATATATAGACCCTTAATATAAGCTCATTACTTTGATCAC
GCACTAACTAATTACTGTGACCTAGGCCCTGGACTAAACACAGTCAGCTC
CTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGGAACG
AGTTCTGGATAACGTCCAACGGCAGCCCTCTAATCACCGAAGCCCTTCCG
GCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCCACTC
CAATCCACGGTTGCTTGCCCTCTTCACCACGGCGAAGCCCTGCGGGACAA
CGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCCGTTC
TCCGCCACAATTTGCATCCTGCCGTTGCCCCTTGTTATGTAGACTACGCT
GTGGGCATTCAAGTTCCAGTGTGGCGCCATCATGGCATTCTGGTAGAGGT
TCCCTTTCTCAGCACTAAGCTGAATGTATCGAAGGATAGGAAGGTTGAAT
CTGTTGACGGTGGTGACGCGTCCGCCGCGGGGGTTGTACGCGTCAGCACC
CGATGGGTCATTGATGTTGTGCTTTAGCTTCATTGTACAGATAGTTTCCT
CGATGCCATTGTCTCCGCTTCCTTGGAATTCTTGTTCTTGTTCTTGTTCT
TGTTCTCTGCCTCTTTGAGGTGACAGTACTCTCAGCTCTTCCTCGACTCT
GACAATAATCCCCTTCTGCATC
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