CX047033

Overview
NameCX047033
Unique NameCX047033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: GLYG2_SOYBN (Glycinin G2 OS=Glycine max GN=Gy2 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.891e-38
Identity = 90/230 (39.13%), Postives = 120/230 (52.17%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY-XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQK--GIIVRVEEELRV 833
            LNAL+P  R+ESE G  E W+ N++  QCA VA+ R  + +  L  PSYTN P+  Y+ QG GI G +FPGCP TY                  HQKV + REGDL+A+PTG A W+YN+  + +V V+++D  + +NQLDQ  R+FYL GN Q Q                            N+  GF    L EAF  N  ++  LQG   ++  G IV V+  LRV
Sbjct:   33 LNALKPDNRIESEGGFIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGNGIFGMIFPGCPSTYQEPQESQQRGRSQRPQDRHQKVHRFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGN-QEQEFLKYQQQQQGGSQSQKGKQQEEENEGSNILSGFAPEFLKEAFGVNMQIVRNLQGENEEEDSGAIVTVKGGLRV 261          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.440e-38
Identity = 92/237 (38.82%), Postives = 121/237 (51.05%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY--------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQ-PQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            L A EP + V S+AG TEF+D ++E  QC  V+V R  I+ RGL++P YTN   L Y++QGRGI G  FPGCPETY                         HQK+ + R+GD++ALP G A+W YNDG   +V + + D+ N  NQLD   R F L GN + PQ                            N+F GF   LL+EAF  +  +  +LQ    Q+G IVRVE  L +L
Sbjct:   51 LQAFEPIRSVRSQAGTTEFFDVSNELFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPETYQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDINNGANQLDPRQRDFLLAGNKRNPQ-----------------AYRREVEEWSQNIFSGFSTELLSEAFGISNQVARQLQCQNDQRGEIVRVERGLSLL 270          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.435e-37
Identity = 91/237 (38.40%), Postives = 121/237 (51.05%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY--------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQ-PQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            L A EP + V S+AG TEF+D ++EQ QC  V+V R  I+ RGL++P YTN   L Y++QGRGI G  FPGCPE+Y                         HQK+ + R+GD++ALP G A+W YNDG   +V + + D+ N  NQLD   R F L GN + PQ                            N+F GF   LL+EA   +  +  +LQ    Q+G IVRVE  L +L
Sbjct:   51 LQAFEPIRSVRSQAGTTEFFDVSNEQFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPESYQQQFQQSGQAQLTESQSQSQKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDLNNGANQLDPRQRDFLLAGNKRNPQ-----------------AYRREVEERSQNIFSGFSTELLSEALGVSSQVARQLQCQNDQRGEIVRVEHGLSLL 270          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.447e-37
Identity = 87/232 (37.50%), Postives = 118/232 (50.86%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY----XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            L A EP ++V SEAGVTE++D+ +E  QC    V R  IQ +GL+VP YTN P + Y++QGRG  G  FPGCP TY                     HQK+ Q R+GD+VALP G A+W YNDG + +V V + DV N+ NQL+   ++F L GN                                N+F GF   +L+EA   N     +LQ    Q+G I+ V+  L++L
Sbjct:   50 LQAFEPLRKVRSEAGVTEYFDEKNELFQCTGTFVIRRVIQPQGLLVPRYTNIPGVVYIIQGRGSMGLTFPGCPATYQQQFQQFSSQGQSQSQKFRDEHQKIHQFRQGDIVALPAGVAHWFYNDGDAPIVAVYVYDVNNNANQLEPRQKEFLLAGN------------NNRAQQQQVYGSSIEQHSGQNIFSGFGVEMLSEALGINAVAAKRLQSQNDQRGEIIHVKNGLQLL 269          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: GLYG3_SOYBN (Glycinin G3 OS=Glycine max GN=GY3 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.452e-37
Identity = 87/232 (37.50%), Postives = 121/232 (52.16%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQ-LXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQG--PQMQKGIIVRVEEELRVLS 839
            LNAL+P  R+ESE G  E W+ N++  QCA VA+ R  + +  L  PSYTN P+  Y+ QG GI G +FPGCP T+                 HQK+   REGDL+A+PTG A W+YN+  + +V V+L+D  +  NQLDQ  R+FYL GN + + L                           ++  GF    L  AF  +  ++ KLQG   + +KG IV V+  L V+S
Sbjct:   36 LNALKPDNRIESEGGFIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNAPQEIYIQQGSGIFGMIFPGCPSTF--EEPQQKGQSSRPQDRHQKIYHFREGDLIAVPTGFAYWMYNNEDTPVVAVSLIDTNSFQNQLDQMPRRFYLAGNQEQEFLQYQPQKQQGGTQSQKGKRQQEEENEGGSILSGFAPEFLEHAFVVDRQIVRKLQGENEEEEKGAIVTVKGGLSVIS 265          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: 11S2_SESIN (11S globulin seed storage protein 2 OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.120e-37
Identity = 82/235 (34.89%), Postives = 121/235 (51.49%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY---------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL-GGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEEL 827
            ++  +P  R++SE G TE WD+  EQ QCA +   R  I+  GL +P+Y  +P L Y+ +G+G+   + PGC ETY                          HQKV ++R+GD+VA+P+G+A+W YNDG  +LV V++ DV +  NQLDQ  R FYL GG P+                              N+FR FD  LL+EAFN   + I ++Q  + ++G+IV   E +
Sbjct:   39 ISGAQPSLRIQSEGGTTELWDERQEQFQCAGIVAMRSTIRPNGLSLPNYHPSPRLVYIERGQGLISIMVPGCAETYQVHRSQRTMERTEASEQQDRGSVRDLHQKVHRLRQGDIVAIPSGAAHWCYNDGSEDLVAVSINDVNHLSNQLDQKFRAFYLAGGVPR-----------------SGEQEQQARQTFHNIFRAFDAELLSEAFNVPQETIRRMQSEEEERGLIVMARERM 256          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.706e-36
Identity = 83/236 (35.17%), Postives = 123/236 (52.12%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY--------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            L A EP ++V S+AG+TE++D+ +EQ +CA V+V R  I+ +GL++P Y N P L Y++QGRG  G  FPGCP T+                         HQ+V  I++GD+VALP G  +W YNDG + +V V + DV N+ NQL+   ++F L GN + +                            N+F GF  +LL+EA   +     K+Q    Q+G I+RV + L+ L
Sbjct:   50 LQAFEPLRQVRSQAGITEYFDEQNEQFRCAGVSVIRRVIEPQGLLLPQYHNAPGLVYILQGRGFTGLTFPGCPATFQQQFQQFDQARFAQGQSKSQNLKDEHQRVHHIKQGDVVALPAGIVHWCYNDGDAPIVAVYVFDVNNNANQLEPRQKEFLLAGNNKRE-----------------------QQFGQNIFSGFSVQLLSEALGISQQAAQKIQSQNDQRGEIIRVSQGLQFL 262          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.706e-36
Identity = 90/236 (38.14%), Postives = 120/236 (50.85%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY--------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            L A EP + V S+AG TEF+D ++E  QC  V V R  I+ RGL++P Y+N   L YV+QGRGI G  FPGCPETY                         HQK+ + ++GD+VALP G A+W YNDG + +V + + D+ NS NQLD   R F+L GN +                              N+F GF   LL+EA   +  +  +LQ    Q+G IVRVE  L +L
Sbjct:   50 LQAFEPIRTVRSQAGTTEFFDVSNELFQCTGVFVVRRVIEPRGLLLPHYSNGATLVYVIQGRGITGPTFPGCPETYQQQFQQSEQDQQLEGQSQSHKFRDEHQKIHRFQQGDVVALPAGVAHWCYNDGDAPIVAIYVTDIYNSANQLDPRHRDFFLAGNNK---------------IGQQLYRYEARDNSKNVFGGFSVELLSEALGISSGVARQLQCQNDQRGEIVRVEHGLSLL 270          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.872e-36
Identity = 82/236 (34.75%), Postives = 123/236 (52.12%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY--------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            L A EP ++V S+AG+ E++D+ +EQ +CA V+V R  I+ +GL++P Y N P L Y++QGRG  G  FPGCP T+                         HQ+V  I++GD+VALP G  +W YNDG + +V V + DV N+ NQL+   ++F L GN + +                            N+F GF  +LL+EA   +  +  K+Q    Q+G I+RV + L+ L
Sbjct:   50 LQAFEPLRQVRSQAGIIEYFDEQNEQFRCAGVSVIRRVIEPQGLLLPQYHNAPGLVYILQGRGFTGLTFPGCPATFQQQFQPFDQAQFAEGQSQSQNLKDEHQRVHHIKQGDVVALPAGIVHWCYNDGDAPIVAVYVFDVNNNANQLEPRQKEFLLAGNNKRE-----------------------QQFGQNIFSGFSVQLLSEALGISQQVAQKIQSQNDQRGEIIRVSQGLQFL 262          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: CRU1_RAPSA (Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.290e-35
Identity = 88/240 (36.67%), Postives = 124/240 (51.67%), Query Frame = 3
Query:  150 DLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY-----------XXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            +L+ L+P + ++SEAG  E+WD N  QL+CA V+V R  I+Q GL +P++ ++P++ YVVQG GI G V PGC ET+                            HQKV  +R GD++A+  GSA+WIYN G   LV+V L+D+ N  NQLD+  R F L GN  PQ                            N+  GFD ++LA+A      L  +LQ  Q  +G IVRV+   +V+
Sbjct:   41 NLDVLQPTETIKSEAGRLEYWDHNHPQLRCAGVSVSRLIIEQGGLYLPTFFSSPKIAYVVQGMGISGRVVPGCAETFMDSQPMQGQGQQGQQGQQGQQQQGFRDMHQKVEHVRHGDVIAITAGSAHWIYNTGDQPLVIVCLLDIANYQNQLDRNPRTFRLAGN-NPQ----------------GGSHQQQQQQQQNMLSGFDPQVLAQALKMQLRLAQELQNQQDNRGNIVRVKGPFQVV 263          
The following BLAST results are available for this feature:
BLAST of CX047033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
GLYG2_SOYBN2.891e-3839.13Glycinin G2 OS=Glycine max GN=Gy2 PE=1 SV=2[more]
GLUA2_ORYSJ6.440e-3838.82Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
GLUA1_ORYSJ1.435e-3738.40Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
GLUB1_ORYSJ2.447e-3737.50Glutelin type-B 1 OS=Oryza sativa subsp. japonica ... [more]
GLYG3_SOYBN5.452e-3737.50Glycinin G3 OS=Glycine max GN=GY3 PE=3 SV=1[more]
11S2_SESIN7.120e-3734.8911S globulin seed storage protein 2 OS=Sesamum ind... [more]
SSG1_AVESA2.706e-3635.1712S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
GLUA3_ORYSJ2.706e-3638.14Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA7.872e-3634.7512S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]
CRU1_RAPSA2.290e-3536.67Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11G04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11G04-N8-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047033 ID=CX047033; Name=CX047033; organism=Citrus sinensis; type=EST; length=840bp
TTCAAATGGCTTCCACTTATTTGCTTTGTTTAGGGCTTGGGTTTCTAATT
CTCTTCCACGCCTGCTTTGCTCAGATAGCGCAGGGAACAGACGCAACTCG
GGAGCAACAGCAACAGCAGCAACGCTTCCAAACCCAGTGTAATATCCAGG
ACCTCAACGCCCTCGAACCCCAACAACGGGTAGAGTCCGAAGCTGGCGTC
ACAGAGTTCTGGGACCAGAACGACGAGCAGTTACAATGCGCCAATGTTGC
CGTGTTTCGCCACCGTATCCAACAGAGAGGCCTCGTTGTGCCTTCATACA
CCAACACTCCTGAGCTCTTCTATGTTGTTCAAGGTAGAGGCATTCACGGT
GCTGTATTCCCCGGATGTCCCGAGACATACCAAGAATCACAGCAAAGGTC
GTCAGAGAGTCAGAGTAGATCCCAAGATCAACACCAAAAAGTTAGACAAA
TACGTGAGGGTGATCTGGTTGCATTGCCTACTGGATCGGCTAACTGGATT
TACAACGATGGCCCATCAGAGCTTGTTGTGGTCGCTCTTGTTGATGTTGG
CAATTCTGATAACCAGCTTGATCAGTTCTTGAGGAAATTCTACCTTGGTG
GCAACCCACAACCACAACTCCAAGGTTACAGTCAAAGTCAAGGCAGCAGA
TATCAGGGAAGCCAAGGCGGGGAGGGTGGCGACCGCAGCAGGAGAGGTGG
CAATCTCTTCCGCGGCTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACG
CGAACCCAGATCTAATCAGTAAACTGCAGGGGCCACAGATGCAGAAGGGG
ATTATTGTCAGAGTCGAGGAAGAGCTGAGAGTACTGTCAC
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