CX047033

Overview
NameCX047033
Unique NameCX047033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: CRU1_BRANA (Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.793e-22
Identity = 79/267 (29.59%), Postives = 116/267 (43.45%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQ-----GRGIHG--------AVFP-------------------------GCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL-GGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            LNALEP   +++EAG  E WD +  QL+C+ V+  R+ I+ +GL +PS+ +T +L +V +     GR + G        +VF                          G  +                   HQKV  IR GD +A   G A W YNDG   LV+V+++D+ +  NQLD+  R FYL G NPQ Q+                           N+  GF   +LA+AF  +     +LQ  Q  +G I+RV+    V+
Sbjct:   35 LNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPSGGSPSGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQV----------------WIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRVQGPFSVI 285          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: CRUA_BRANA (Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.954e-22
Identity = 78/269 (29.00%), Postives = 112/269 (41.64%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVV----------------------------------------QGRGIHGAVFPGCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL-GGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            LNALEP   +++EAG  E WD +  QL+C+ V+  R+ I+ +GL +PS+ +T  L +V                                         QG+G  G    G  +                   HQKV  IR GD +A   G A W YNDG   LV+V+++D+ +  NQLD+  R FYL G NPQ Q+                           N+  GF   +LA+AF  +     +LQ  Q  +G I+RV+    V+
Sbjct:   35 LNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFSTARLSFVAKGEGLMGRVVLCAETFQDSSVFQPSGGSPFGEGQGQGQQGQGQGHQGQ---GQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQV----------------WIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRVQGPFSVI 284          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: 13S3_FAGES (13S globulin seed storage protein 3 OS=Fagopyrum esculentum GN=FAGAG1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY 380
            L A EP +RV SEAGVTE WD +  + +CA     R  IQ  GL++PSY+N P + +V QGRG+ G V PGCPET+
Sbjct:   49 LTASEPSRRVRSEAGVTEIWDHDTPEFRCAGFVAVRVVIQPGGLLLPSYSNAPYITFVEQGRGVQGVVVPGCPETF 124          

HSP 2 Score: 72.7886 bits (177), Expect = 2.725e-12
Identity = 42/139 (30.22%), Postives = 69/139 (49.64%), Query Frame = 3
Query:  432 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG---NPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAF-NANPDLISKLQGPQMQKGIIVRVEE-ELRV 833
            HQK+ +IR+GD++  P G   W +N+G ++L+ + L D  +  NQLD+ +R F+L G     +                              N+  GF++ +L E F N + + ISKL+G   Q+G IV+  + +LRV
Sbjct:  185 HQKIFRIRDGDVIPSPAGVVQWTHNNGDNDLISITLYDANSFQNQLDENVRNFFLAGQSKQSREDRRSQRQTREEGSDRQSRESQDDEALLEANILSGFEDEILQEIFRNVDQETISKLRGENDQRGFIVQARDLKLRV 323          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: 13S1_FAGES (13S globulin seed storage protein 1 OS=Fagopyrum esculentum GN=FA02 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY 380
            L A EP +RV SEAGVTE WD +  + +CA     R  IQ  GL++PSY+N P + +V QGRG+ G V PGCPET+
Sbjct:   49 LTASEPSRRVRSEAGVTEIWDNDTPEFRCAGFVAVRVVIQPGGLLLPSYSNAPYITFVEQGRGVQGVVVPGCPETF 124          

HSP 2 Score: 72.4034 bits (176), Expect = 3.558e-12
Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = 3
Query:  432 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG---NPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAF-NANPDLISKLQGPQMQKGIIVRVEE-ELRV 833
            HQK+ +IR+GD++  P G   W +NDG ++L+ + L D  +  NQLD  +R F+L G     +                              N+  GF + +L E F N + + ISKL+G   Q+G IV+  + +LRV
Sbjct:  215 HQKIFRIRDGDVIPSPAGVVQWTHNDGDNDLISITLYDANSFQNQLDGNVRNFFLAGQSKQSREDRRSQRQTREEGSDRQSRESDDDEALLEANILTGFQDEILQEIFRNVDQETISKLRGDNDQRGFIVQARDLKLRV 353          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: CRU3_BRANA (Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.110e-16
Identity = 37/77 (48.05%), Postives = 57/77 (74.03%), Query Frame = 3
Query:  150 DLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQGRGIHGAVFPGCPETY 380
            +L+ L+P + ++SEAG  E+WD N+ Q++CA V+V R  I+Q GL +P++ ++P++ YVVQG GI G V PGC ET+
Sbjct:   41 NLDVLQPTETIKSEAGRVEYWDHNNPQIRCAGVSVSRVIIEQGGLYLPTFFSSPKISYVVQGMGISGRVVPGCAETF 117          

HSP 2 Score: 83.1889 bits (204), Expect = 2.016e-15
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 3
Query:  432 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            HQKV  +R GD++A+  GS++WIYN G   LV++ L+D+ N  NQLD+  R F L GN  PQ                            N+  GFD ++LA+A   +  L  +LQ  Q  +G IVRV+   +V+
Sbjct:  177 HQKVEHVRHGDIIAITAGSSHWIYNTGDQPLVIICLLDIANYQNQLDRNPRTFRLAGN-NPQ-----------------GGSQQQQQQQQNMLSGFDPQVLAQALKIDVRLAQELQNQQDSRGNIVRVKGPFQVV 293          
BLAST of CX047033 vs. ExPASy Swiss-Prot
Match: CRU2_BRANA (Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.485e-14
Identity = 76/274 (27.74%), Postives = 101/274 (36.86%), Query Frame = 3
Query:  153 LNALEPQQRVESEAGVTEFWDQNDEQ-----------------------LQCANVAVFRHRIQQRGLVVPSYTNTPELFYVVQ----------------------GRGIHGAVFPGCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG-NPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNANPDLISKLQGPQMQKGIIVRVEEELRVL 836
            LNALEP   +++EAG  E WD +  Q                       L  ANV+         G VVP    T +   V Q                      G+G  G    G  +                   HQKV  IR GD +A   G A W YN+G   LV+VA++D+ +  NQLD+   +FYL G NPQ Q                            N+  GF   +LA+AF  +     +LQ  Q  +G IVRV+    V+
Sbjct:   35 LNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESQGLYLPSFLNTANVSFVAKGQGLMGRVVPGCAETFQDSSVFQPGSGSPFGEGQGQGQQGQGQGQGQG-QGKGQQGQGKGQQGQSQGQQGQGQGFRDMHQKVEHIRSGDTIATHPGVAQWFYNNGNQPLVIVAVMDLASHQNQLDRNPSQFYLAGKNPQGQ----------------SWLHGRGQQPQNNILNGFSPEVLAQAFKIDVRTAQQLQNQQDNRGNIVRVQGPFGVI 291          
The following BLAST results are available for this feature:
BLAST of CX047033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
CRU1_BRANA3.793e-2229.59Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=... [more]
CRUA_BRANA4.954e-2229.00Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1[more]
13S3_FAGES3.674e-1752.6313S globulin seed storage protein 3 OS=Fagopyrum e... [more]
13S1_FAGES3.674e-1752.6313S globulin seed storage protein 1 OS=Fagopyrum e... [more]
CRU3_BRANA3.110e-1648.05Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=... [more]
CRU2_BRANA6.485e-1427.74Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11G04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11G04-N8-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047033 ID=CX047033; Name=CX047033; organism=Citrus sinensis; type=EST; length=840bp
TTCAAATGGCTTCCACTTATTTGCTTTGTTTAGGGCTTGGGTTTCTAATT
CTCTTCCACGCCTGCTTTGCTCAGATAGCGCAGGGAACAGACGCAACTCG
GGAGCAACAGCAACAGCAGCAACGCTTCCAAACCCAGTGTAATATCCAGG
ACCTCAACGCCCTCGAACCCCAACAACGGGTAGAGTCCGAAGCTGGCGTC
ACAGAGTTCTGGGACCAGAACGACGAGCAGTTACAATGCGCCAATGTTGC
CGTGTTTCGCCACCGTATCCAACAGAGAGGCCTCGTTGTGCCTTCATACA
CCAACACTCCTGAGCTCTTCTATGTTGTTCAAGGTAGAGGCATTCACGGT
GCTGTATTCCCCGGATGTCCCGAGACATACCAAGAATCACAGCAAAGGTC
GTCAGAGAGTCAGAGTAGATCCCAAGATCAACACCAAAAAGTTAGACAAA
TACGTGAGGGTGATCTGGTTGCATTGCCTACTGGATCGGCTAACTGGATT
TACAACGATGGCCCATCAGAGCTTGTTGTGGTCGCTCTTGTTGATGTTGG
CAATTCTGATAACCAGCTTGATCAGTTCTTGAGGAAATTCTACCTTGGTG
GCAACCCACAACCACAACTCCAAGGTTACAGTCAAAGTCAAGGCAGCAGA
TATCAGGGAAGCCAAGGCGGGGAGGGTGGCGACCGCAGCAGGAGAGGTGG
CAATCTCTTCCGCGGCTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACG
CGAACCCAGATCTAATCAGTAAACTGCAGGGGCCACAGATGCAGAAGGGG
ATTATTGTCAGAGTCGAGGAAGAGCTGAGAGTACTGTCAC
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