CX047028

Overview
NameCX047028
Unique NameCX047028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27
Identity = 77/264 (29.17%), Postives = 132/264 (50.00%), Query Frame = 3
Query:   72 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEI-PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD-QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836
            E  P+IDLS ++         ++  AC  WG F++ NHG+   LLD ++ LT   +   + ++ K       V+  G+  + S  N   W   F +   P+ +  ++ P     Y + ++E+   ++K+A                  +     S  +G     ++++YP CP+PD   GL AHTD+  + +L+Q++  +GLQ+ +DD  WV  PP+  S+V+N+GD L ++TNG + SVLHR       +R S+A  + P SD
Sbjct:   48 ETLPLIDLSDIH------VATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNN-TAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSD 304          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.724e-27
Identity = 78/264 (29.55%), Postives = 130/264 (49.24%), Query Frame = 3
Query:   81 PIIDLSKLNGD--ERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQ--RFKQMVASKGLEAVQSEVND---LDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDA 839
            PII L  ++ +  +R+   + I  ACE+WG F++V+HG+  E++  +    KE +    ++  RF      KG   V S +      DW    T+F       + +  PD  + +    ++++ +L ++A                   K             V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  KD+   W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A
Sbjct:   42 PIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVV---VNFYPKCPEPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEA 301          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.330e-26
Identity = 75/262 (28.63%), Postives = 124/262 (47.33%), Query Frame = 3
Query:   81 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQ--RFKQMVASKGLEAVQSEVND---LDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDA 839
            P+I L  ++G  R+   + +  ACE+WG F++++HG+  +L+  + RL +E +    +   R+      KG   V S +      DW    T+F   +   +    P+    +   ++ ++  L  ++                   K             V+ YP CP+PDL  GL+ HTD G I LL QD  V GLQ  +D    W+ V P+  + V+NLGD    ++NG++K+  H+ +   E +R+SIA+F NP  DA
Sbjct:   44 PLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVV---VNFYPRCPQPDLTLGLKRHTDPGTITLLLQD-LVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDA 301          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.787e-25
Identity = 76/260 (29.23%), Postives = 128/260 (49.23%), Query Frame = 3
Query:   81 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWEST------FFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836
            P++DLS    DE      ++  A E+WG F++VNHGI  EL+  +Q++ +E +     ++      +  +E     + +LD +         +L   P S  N    P    DYR+  +E+A  ++ ++                  K+V     G  +   +++YPP P  D   GL  HTD  G+ L+  + E+ GLQ+ KDD W++V  +  +I++N+GDQ+ +++NGKYK+VLH+     E  RMS     +P  D
Sbjct:    3 PVVDLSC--PDEELVARTVVK-ASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGYGRRI-ELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV----NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITN-EIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYD 253          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.252e-25
Identity = 73/265 (27.55%), Postives = 129/265 (48.68%), Query Frame = 3
Query:   81 PIIDLSKLNGDERSATMEM---INDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVAS--KG---LEAVQSEVNDLDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDA 839
            PII L+ L+ D      E+   I  ACE+WG F++V+HGI   L+  + RL++E +    +++ +       +G   +  V    + +DW    T+F   +   + +  P   + +R   + ++ +L  +                    K     +       ++ YP CP+PDL  G+R HTD G I +L QD  V GLQ  +D    W+ V P++ + V+NLGD    ++NG++++  H+ +  +  +R+SIA+F NP  +A
Sbjct:   39 PIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVL---INYYPTCPQPDLTLGVRRHTDPGTITILLQD-MVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNA 299          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.011e-23
Identity = 77/270 (28.52%), Postives = 120/270 (44.44%), Query Frame = 3
Query:   81 PIIDLSKLNGDERSA--TMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVN-------DLDWESTFFLRHLP-VSNMAEIPDLEDD--------YRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836
            P+IDL  L  D  S      +I++AC+  GFF +VNHGIS EL+      T   +   + +  KQ V  K  E+V    +        L W+ T   R    +S    + D   D        + K  +E+   +  ++                  ++ F  +       +++ YPPC KPDL  G   H D   + +L QD  V+GLQ+  ++QW  + P   + V+N+GD    ++N +YKS LHR +  +E  R S+A F  P  D
Sbjct:   62 PLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSE--KQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIM---RLNYYPPCIKPDLTLGTGPHCDPTSLTILHQD-HVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKD 325          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.480e-23
Identity = 72/257 (28.02%), Postives = 130/257 (50.58%), Query Frame = 3
Query:   81 PIIDLSKL--NGDERSATMEMINDACENWGFFELVNHGISHELLDTV-----------QRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIA 812
            P+I+L+ L  N + R   +E I +A E +GFF++VNHGI  +++D +            ++ +++Y +  D+  K  + S     +       +W  T  +  +  SN  +  +  D  R  + +++  +  +                   +++         G     YP CP+P+L  G   H+D+G + +L QD ++ GLQ+L ++QW+DVP +  ++VIN+ D L++ITN K+KSV HRV+A   G R+S+A
Sbjct:   92 PVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSR--DRFNKNFLYSSNYVLIPGIA--CNWRDT--MECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLG---HYYPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVA 338          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.852e-23
Identity = 77/269 (28.62%), Postives = 129/269 (47.96%), Query Frame = 3
Query:   69 MENFPIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTV-----------QRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIA-QTEGNRMSIASFYNPG 830
            ++  P IDL   +  +   R+  +E I +A   WGFF+++NHG+S ELL+ +           Q + KE Y +   +RF  +      +   S     +W  TF     P +   +  DL +  R  M E++ ++  +                     +   SKG    +    YPPCP+PDL  G   H+D   + +L  D ++ GLQ+ ++  W DVP +  +++IN+GD L++ITN K+ S+ HRV+A +    R+S+A F+  G
Sbjct:   61 LKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYL---SNFDLFSSPA--ANWRDTFSCTMAPDTPKPQ--DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDC-SKGLLMLSHY--YPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTG 318          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.904e-22
Identity = 77/268 (28.73%), Postives = 126/268 (47.01%), Query Frame = 3
Query:   72 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEA-----VQSEVNDLDWESTFFLRHLPVSNMAEI--PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXX----KKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQ-WVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFY-NPGSD 836
            E+ P+IDLS  N D  +    +I DA + WG F++ NHGIS +LLD ++ L+K  +    +++ +   + KG+       +        W   F +      N      P     Y   ++E+  E+EK+A                      K    GSK      ++++YP CP+P+   GL AHTD+  + +L Q +   GLQ+ +++  WV V P    +V+N+GD   +++NGK  SV+HR       +R+SIA  +  P  D
Sbjct:   47 ESIPVIDLS--NPDVTT----LIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGD 307          
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.104e-21
Identity = 72/284 (25.35%), Postives = 128/284 (45.07%), Query Frame = 3
Query:   30 EGRLWELRNKQITMENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYG-----KCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFL------RHLPV---SNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQ----WVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 827
            +  +W     + T    P+I LS  N +E      ++  ACE WG F + +HG+SH LL  V    K  +      K +  R        G+  +    + L W   F +      RH  +    + AE  ++ ++Y+KAM + +  L  ++                   K   G+       ++++YP CP P L  GL  HTD+  + +L+Q + + GL++    +    W+ V P++ S+V+ +GD   +I+NG+++S +HR +     +R+S A F  P
Sbjct:   31 DSHVWSKPEPETTSGPIPVISLS--NPEEHG----LLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRL--ISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGN-IPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGP 305          
The following BLAST results are available for this feature:
BLAST of CX047028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
G3OX2_ARATH5.114e-2729.17Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
FL3H_PETHY8.724e-2729.55Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_HORVU4.330e-2628.63Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FLS_MATIN4.787e-2529.23Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FNSI_PETCR6.252e-2527.55Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
GAOX1_ARATH2.011e-2328.52Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
DV4H_CATRO4.480e-2328.02Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_ARATH5.852e-2328.621-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3OX4_ARATH2.904e-2228.73Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G3OX3_ARATH1.104e-2125.35Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F12-L24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047028 ID=CX047028; Name=CX047028; organism=Citrus sinensis; type=EST; length=841bp
CTAGAGTTTTTTAAGTGATCATAGAGTAAGAAGGGAGATTGTGGGAGTTA
AGAAACAAACAAATAACAATGGAGAATTTTCCAATTATTGACTTGTCAAA
GCTCAATGGTGATGAGAGAAGTGCTACCATGGAAATGATCAATGATGCCT
GTGAGAACTGGGGTTTCTTTGAGTTGGTGAATCATGGGATATCACATGAG
CTGCTGGACACTGTTCAGAGGTTGACAAAGGAGCATTACGGGAAGTGTAT
GGACCAAAGATTCAAGCAAATGGTGGCAAGCAAGGGCCTTGAAGCTGTTC
AGTCCGAAGTTAATGATTTGGACTGGGAAAGCACTTTCTTCTTGCGCCAC
CTTCCTGTTTCAAACATGGCTGAAATCCCCGATCTTGAAGATGATTACAG
GAAGGCAATGAAGGAATTTGCCGTTGAATTGGAGAAGGTTGCTGAGCAAC
TTCTGGAATTGTTGTGTGAGAATCTTGGGCTGGAGGAAGGGTATTTGAAG
AAAGTGTTTTATGGGTCCAAAGGACCAACCTTTGGCACCAAGGTCAGCAA
TTACCCTCCATGCCCAAAACCAGATCTGATCAAGGGACTTAGGGCCCATA
CTGATGCTGGTGGCATCATCTTGCTCTTTCAAGATGACGAAGTCAGTGGC
CTCCAGCTGCTCAAAGATGACCAATGGGTTGATGTTCCACCCATGAAACA
CTCCATTGTCATCAACCTCGGTGACCAACTTGAGGTGATAACCAATGGCA
AGTACAAGAGTGTGCTACATCGCGTGATTGCTCAAACAGAGGGTAACAGG
ATGTCCATAGCATCATTTTACAATCCAGGCAGTGATGCTGT
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