CX047028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 73/268 (27.24%), Postives = 125/268 (46.64%), Query Frame = 3 Query: 81 PIIDLS-KLNGDERSAT--MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE-----VNDLDWESTFFLRHLPVSNMAEIPD-----LEDDYRKAMKEFA---VELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836 P+ID+ L+GD R+ ++ +ACE GFF++VNHGI ELL R + + ++ + + S + L W+ T R P S+ A + D L +D+R+ + +A E+ +++ ++ F G+ +++ YPPC +P G H D + +L QD+ V GLQ+ + +W + P + V+N+GD ++NG+YKS LHR + ++ R S+A F P D Sbjct: 40 PLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCP-SDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMD 302
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 72/262 (27.48%), Postives = 126/262 (48.09%), Query Frame = 3 Query: 69 MENFPIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDL------DWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIA-QTEGNRMSIASFYN 824 ++ P IDL + + +E I +A WGFF+++NHG+S ELL+ ++ ++ + + + R G + + DL +W TF+ P + E DL + R M E++ ++ + K + KG +PPCP+PDL G H+D G + + D + GLQ+ ++ W DVP + +++IN+GD L++ITN K+ S+ HRV+A + R+S+A F++ Sbjct: 61 LKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAP--DPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMEC-LKG--LRMLCHYFPPCPEPDLTFGTSKHSD-GSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFH 316
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21 Identity = 68/256 (26.56%), Postives = 122/256 (47.66%), Query Frame = 3 Query: 81 PIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTV----QRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 827 P+IDLS L E R ++ + A + WGFF++VNHGI ++ + + ++L + + + +RF + + S + + S H+ +S ++ I D ++ R ++ + E+ +VA + +F +++ Y P + GL HTD + +L QD ++ GL+L + QW+ V P ++ +N+GD + ++NG Y+SV HRVI+ RMSIA F P Sbjct: 41 PVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQY-SVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENS---FLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCP 291
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20 Identity = 73/268 (27.24%), Postives = 120/268 (44.78%), Query Frame = 3 Query: 81 PIIDLSK-LNGDE--RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGK---CMDQRFKQMVASKGLEA---VQSEVNDLDWESTFFLRHLPVSNM----------AEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 827 P+IDL+ L+GD S +++ A GFF + NHG+ LL L + + K C Q+ ++ A V + L W+ T + P + ++ D +D+ K +E+A + ++ K+ F S +++ YP C +P+L G H D + +L QD +V GLQ+ D++W +PP H+ V+N+GD +TNG+YKS LHR + +E R + A F P Sbjct: 59 PLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAY-LHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIF---RLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCP 321
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20 Identity = 73/268 (27.24%), Postives = 124/268 (46.27%), Query Frame = 3 Query: 81 PIIDLS-KLNGDERSAT--MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE-----VNDLDWESTFFLRHLPVSNMAEIPD-----LEDDYRKAMKEFA---VELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836 P+ID+ L+GD +A ++ +ACE GFF++VNHGI ELL R + + ++ + + S + L W+ T R P S+ A + D L +D+R+ + +A E+ +++ ++ F G+ +++ YPPC +P G H D + +L QD+ V GLQ+ + +W + P + V+N+GD ++NG+YKS LHR + + R S+A F P D Sbjct: 40 PLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCP-SDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMD 302
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.081e-20 Identity = 72/264 (27.27%), Postives = 125/264 (47.35%), Query Frame = 3 Query: 81 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVN---DLDWESTFFLRHLPVSNMAEI-PDL---EDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDL-------IKGLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 827 P+ID+S + + + A ++ ACE++GFF+++NHG+S EL+ ++ T + + + + K VA S++ D+ W + S + P L +R A++E+ + K+ + ++++YPPCP + + G HTD II + + + SGLQ+ L D W+ VPP S N+GD L+V+TNG++KSV HRV+A + +R+S+ F P Sbjct: 19 PVIDMS--DPESKHALVK----ACEDFGFFKVINHGVSAELVSVLEHETVDFFS--LPKSEKTQVAGYPFGYGNSKIGRNGDVGWVEYLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQ-IISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGP 273
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20 Identity = 72/268 (26.87%), Postives = 124/268 (46.27%), Query Frame = 3 Query: 81 PIIDLS-KLNGDERSAT--MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE-----VNDLDWESTFFLRHLPVSNMAEIPD-----LEDDYRKAMKEFA---VELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836 P+I++ L+GD +A ++ +ACE GFF++VNHGI ELL R + + ++ + + S + L W+ T R P S+ A + D L +D+R+ + +A E+ +++ ++ F G+ +++ YPPC +P G H D + +L QD+ V GLQ+ + +W + P + V+N+GD ++NG+YKS LHR + + R S+A F P D Sbjct: 40 PLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCP-SDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMD 302
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 71/275 (25.82%), Postives = 109/275 (39.64%), Query Frame = 3 Query: 75 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY-----GKCMDQRFKQMVASKGLEAVQSEVNDLDWESTF----------------FLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSD 836 N P IDLS + D +I +AC GFF +VNHG+S L+ RL + + GK QR L W+ T + + + DY +AM ++++ ++ + ++++YPPC PDL G H D + +L QD V+GLQ+ D+QW + P + V+N+GD ++NG +KS LHR + E R S+A F P D Sbjct: 62 NVPFIDLS--SQDSTLEAPRVIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIM----------RLNHYPPCQTPDLTLGTGPHCDPSSLTILHQD-HVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKD 323
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19 Identity = 74/269 (27.51%), Postives = 123/269 (45.72%), Query Frame = 3 Query: 81 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK--------------QMVASKGLEAVQ-SEVNDLDWESTFFLRHLPVSN--MAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQ--LLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 827 PIIDL + ++ I AC+++G F+++NHG EL+ + KE + +++ K + A +E Q S L W+ T P+ + P+ YR+ + +++VE+ K+ K ++ ++ ++NY PPCP P G H D I LL QD + GLQ ++KD W+ V P+ + V+NLG L+VITN K++ +HRV+ +R+SIA+ P Sbjct: 36 PIIDLQQ----HHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGL-----KLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQD--LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGP 293
BLAST of CX047028 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19 Identity = 73/266 (27.44%), Postives = 123/266 (46.24%), Query Frame = 3 Query: 54 NKQITMEN-FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLEAVQSEVN-DLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDL----IKGLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 827 N IT + P++DLSK + +I ACE++GFF+++NHGI + + ++ + + ++ K A+ G + +N D+ W L N + + D +R +K++ + +A K +V++YP CP+ + + G HTD II + + + SG Q+ L+D W+ VPP S IN+GD L+V+TNG++KSV HRV+A R+S+ F P Sbjct: 18 NMPITFSSSIPLVDLSKPDAKT------LIVKACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEKAGPANPFGYGNKRIGLNGDIGWIEYLLLTTNQDHNFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQ-IISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGP 276 The following BLAST results are available for this feature:
BLAST of CX047028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047028 ID=CX047028; Name=CX047028; organism=Citrus sinensis; type=EST; length=841bpback to top |