CX047013

Overview
NameCX047013
Unique NameCX047013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_YEAST (rRNA 2'-O-methyltransferase fibrillarin OS=Saccharomyces cerevisiae GN=NOP1 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.152e-70
Identity = 128/174 (73.56%), Postives = 153/174 (87.93%), Query Frame = 3
Query:  285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            +KVV+EPHRH GV+IA+GKED LVTKN+  GE+VY EKRISV+    EDG   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR N+IPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+
Sbjct:   84 AKVVIEPHRHAGVYIARGKEDLLVTKNMAPGESVYGEKRISVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNS 257          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBLL1_MOUSE (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus GN=Fbll1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.353e-70
Identity = 129/166 (77.71%), Postives = 150/166 (90.36%), Query Frame = 3
Query:  291 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            V VEPHRHEGVFI +G EDALVT N+V G +VY EKR++V  E+G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA
Sbjct:   80 VSVEPHRHEGVFIYRGAEDALVTLNMVPGVSVYGEKRVTVM-ENGEKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNA 244          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBLL1_HUMAN (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Homo sapiens GN=FBLL1 PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.353e-70
Identity = 128/166 (77.11%), Postives = 150/166 (90.36%), Query Frame = 3
Query:  291 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            V VEPHRHEGVFI +G EDALVT N+V G++VY E+R++V  E G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA
Sbjct:   98 VSVEPHRHEGVFIYRGAEDALVTLNMVPGQSVYGERRVTV-TEGGVKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNA 262          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.755e-70
Identity = 126/174 (72.41%), Postives = 154/174 (88.51%), Query Frame = 3
Query:  285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQ---NEDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            +KVV+EPH+H GVFIA+GKED LVTKN+  GE+VY EKRISV+   +E+G   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+
Sbjct:   85 AKVVIEPHKHAGVFIARGKEDLLVTKNVAPGESVYGEKRISVEEPASEEGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNS 258          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.274e-69
Identity = 127/166 (76.51%), Postives = 148/166 (89.16%), Query Frame = 3
Query:  291 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            VVVEPHR  GVFI KGKEDAL TKN+V GE+VY EKR+SV +  G+ +EYR+WNPFRSKLAA+++GG++N  IKPG ++LYLGAASGTTVSH SD+VGP G+VYAVEFSHRSGRDL+ +AKKR NV+PI+EDARHP KYRMLVGMVDVIFSDVAQPDQARI+ALNA
Sbjct:  117 VVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGS-IEYRVWNPFRSKLAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNA 281          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.323e-69
Identity = 123/174 (70.69%), Postives = 151/174 (86.78%), Query Frame = 3
Query:  285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            +KVV+EPHRH GVFIA+GKED LVT+N+  GE+VY EKRIS++    E+G   TK+EYR+WNPFRSKLAA ++GG+D + I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L+ MAKKR NVIPII+DARHP KYRML+GMVD +F+DVAQPDQARI+ALN+
Sbjct:   86 AKVVIEPHRHAGVFIARGKEDLLVTRNIAPGESVYGEKRISIEEPSKEEGAAPTKIEYRVWNPFRSKLAAGIMGGIDELGIAPGKKVLYLGAASGTSVSHVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNS 259          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.079e-68
Identity = 129/168 (76.79%), Postives = 143/168 (85.12%), Query Frame = 3
Query:  285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            SKV+V PHRH GVF+AK K DALVTKNLV GE +YNEKRI VQNED + VEYR+WNP RSKLA A+  GVDNIWIKPG +VLYLGA+SG TVSHVSDIVGP G VYAVE S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNA
Sbjct:   57 SKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNA 224          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.657e-67
Identity = 128/174 (73.56%), Postives = 151/174 (86.78%), Query Frame = 3
Query:  288 KVVVEPHRHEGVFIAKG-KEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            KV+VEPHRH+GVF+A+G KED L T NLV GE+VY EKRISV+N   E+G   TK EYRIWNPFRSKLAA +LGG++ I++KPG++VLYLGAASGT+VSHV+DIVGP G VYAVEFSHRSGRDL+NMA +RTNVIPI+EDAR P  YRML+ MVDVIF+DVAQPDQARI+ +NA
Sbjct:   79 KVIVEPHRHKGVFVARGGKEDLLATVNLVPGESVYGEKRISVENASKEEGGASTKTEYRIWNPFRSKLAAGILGGLETIYMKPGSKVLYLGAASGTSVSHVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARIVGINA 252          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 3.470e-67
Identity = 122/166 (73.49%), Postives = 147/166 (88.55%), Query Frame = 3
Query:  288 KVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785
            K ++  HR EGVFI KG+++ALVTKN   GE+VYNEKR+SV+ E+G K+EYR+WNP+RSK+AAAV+GG+ +I IKPG++VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRDLVNMAKKRTNV+PII DAR P +YR LVGMVDV+F+DVAQPDQARI+ +N
Sbjct:   64 KTIIVKHRLEGVFICKGQQEALVTKNFFPGESVYNEKRMSVE-ENGEKIEYRVWNPYRSKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMN 228          
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.124e-64
Identity = 121/169 (71.60%), Postives = 143/169 (84.62%), Query Frame = 3
Query:  285 SKVVVEPH-RHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788
            +KV+VE H RHEGVFI +GKE++L T N V GE+VY EKR+SV  E   K EYRIWNPFRSK+AA +  GVD I IKPG++VLY+GAASGTT+SHVSDIVGP GVVY +E SHR GRDL+ MAKKRTNVIPIIEDARHP KYRML+GMVDV+F+DVAQP+QA+I+A N+
Sbjct:   95 AKVIVEKHPRHEGVFIVRGKEESLATLNSVPGESVYGEKRVSV-GEGEDKKEYRIWNPFRSKIAAGLHRGVDEIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPIIEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNS 262          
The following BLAST results are available for this feature:
BLAST of CX047013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FBRL_YEAST1.152e-7073.56rRNA 2'-O-methyltransferase fibrillarin OS=Sacchar... [more]
FBLL1_MOUSE3.353e-7077.71rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBLL1_HUMAN3.353e-7077.11rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBRL_ASHGO9.755e-7072.41rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya ... [more]
FBRL_CAEEL1.274e-6976.51rRNA 2'-O-methyltransferase fibrillarin OS=Caenorh... [more]
FBRL_DEBHA6.323e-6970.69rRNA 2'-O-methyltransferase fibrillarin OS=Debaryo... [more]
FBRL3_ARATH1.079e-6876.79Putative rRNA 2'-O-methyltransferase fibrillarin 3... [more]
FBRL_NEUCR2.657e-6773.56rRNA 2'-O-methyltransferase fibrillarin OS=Neurosp... [more]
FBRL_TETTH3.470e-6773.49rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahy... [more]
FBRL_DICDI6.124e-6471.60rRNA 2'-O-methyltransferase fibrillarin OS=Dictyos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11F04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11F04-L8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047013 ID=CX047013; Name=CX047013; organism=Citrus sinensis; type=EST; length=789bp
TAAGCACACTCATAATCTCAACATAGCCACTCTTTCACTCTTCATCTCAC
TCTTTGTATTCTTTGTAGCCGGACAGAGCATCAAACATGAGACCTCCAAG
AGGACGCGGTGGTGGAGGTGGGTTCAGGGGAGGCAGAGGTGATGGAGGAG
GAAGAGGAAGAGGTGGCGGCCGAGGTGGTGGAGGTGGAAGAGGTGGTGGT
AGCGCTATGAGAGGCCGAGGTGGCGGTCGTGGCGGTGGCCGAGGTGGAGG
AAGAGGCCGCGGTGGTGGAGGAATGAAGGGTGGAAGCAAGGTTGTAGTTG
AGCCTCATAGACACGAAGGAGTGTTCATTGCCAAGGGCAAAGAAGACGCC
CTTGTCACTAAGAATCTCGTCGCCGGTGAGGCTGTATACAATGAGAAGAG
GATCTCCGTCCAGAATGAAGATGGAACCAAAGTTGAGTATAGAATTTGGA
ATCCCTTCCGTTCCAAATTAGCTGCAGCTGTTCTTGGTGGTGTTGATAAT
ATTTGGATTAAACCTGGTGCTAGGGTTCTATACCTTGGTGCTGCTTCCGG
CACAACTGTCTCTCATGTTTCTGACATTGTTGGCCCTAATGGAGTAGTTT
ATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTGGTCAATATGGCA
AAGAAGAGAACTAATGTTATACCCATAATTGAAGATGCTAGACATCCTGC
CAAGTACCGTATGTTGGTCGGTATGGTAGATGTAATATTTTCTGACGTTG
CCCAACCGGATCAGGCGAGGATTTTAGCCCTGAATGCAT
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