CX047013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_YEAST (rRNA 2'-O-methyltransferase fibrillarin OS=Saccharomyces cerevisiae GN=NOP1 PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.152e-70 Identity = 128/174 (73.56%), Postives = 153/174 (87.93%), Query Frame = 3 Query: 285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 +KVV+EPHRH GV+IA+GKED LVTKN+ GE+VY EKRISV+ EDG TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR N+IPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ Sbjct: 84 AKVVIEPHRHAGVYIARGKEDLLVTKNMAPGESVYGEKRISVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNS 257
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBLL1_MOUSE (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus GN=Fbll1 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.353e-70 Identity = 129/166 (77.71%), Postives = 150/166 (90.36%), Query Frame = 3 Query: 291 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 V VEPHRHEGVFI +G EDALVT N+V G +VY EKR++V E+G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA Sbjct: 80 VSVEPHRHEGVFIYRGAEDALVTLNMVPGVSVYGEKRVTVM-ENGEKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNA 244
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBLL1_HUMAN (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Homo sapiens GN=FBLL1 PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.353e-70 Identity = 128/166 (77.11%), Postives = 150/166 (90.36%), Query Frame = 3 Query: 291 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 V VEPHRHEGVFI +G EDALVT N+V G++VY E+R++V E G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA Sbjct: 98 VSVEPHRHEGVFIYRGAEDALVTLNMVPGQSVYGERRVTV-TEGGVKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNA 262
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.755e-70 Identity = 126/174 (72.41%), Postives = 154/174 (88.51%), Query Frame = 3 Query: 285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQ---NEDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 +KVV+EPH+H GVFIA+GKED LVTKN+ GE+VY EKRISV+ +E+G TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ Sbjct: 85 AKVVIEPHKHAGVFIARGKEDLLVTKNVAPGESVYGEKRISVEEPASEEGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNS 258
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.274e-69 Identity = 127/166 (76.51%), Postives = 148/166 (89.16%), Query Frame = 3 Query: 291 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 VVVEPHR GVFI KGKEDAL TKN+V GE+VY EKR+SV + G+ +EYR+WNPFRSKLAA+++GG++N IKPG ++LYLGAASGTTVSH SD+VGP G+VYAVEFSHRSGRDL+ +AKKR NV+PI+EDARHP KYRMLVGMVDVIFSDVAQPDQARI+ALNA Sbjct: 117 VVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGS-IEYRVWNPFRSKLAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNA 281
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 6.323e-69 Identity = 123/174 (70.69%), Postives = 151/174 (86.78%), Query Frame = 3 Query: 285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 +KVV+EPHRH GVFIA+GKED LVT+N+ GE+VY EKRIS++ E+G TK+EYR+WNPFRSKLAA ++GG+D + I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L+ MAKKR NVIPII+DARHP KYRML+GMVD +F+DVAQPDQARI+ALN+ Sbjct: 86 AKVVIEPHRHAGVFIARGKEDLLVTRNIAPGESVYGEKRISIEEPSKEEGAAPTKIEYRVWNPFRSKLAAGIMGGIDELGIAPGKKVLYLGAASGTSVSHVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNS 259
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.079e-68 Identity = 129/168 (76.79%), Postives = 143/168 (85.12%), Query Frame = 3 Query: 285 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 SKV+V PHRH GVF+AK K DALVTKNLV GE +YNEKRI VQNED + VEYR+WNP RSKLA A+ GVDNIWIKPG +VLYLGA+SG TVSHVSDIVGP G VYAVE S G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV P+QA IL+LNA Sbjct: 57 SKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNA 224
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 2.657e-67 Identity = 128/174 (73.56%), Postives = 151/174 (86.78%), Query Frame = 3 Query: 288 KVVVEPHRHEGVFIAKG-KEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 KV+VEPHRH+GVF+A+G KED L T NLV GE+VY EKRISV+N E+G TK EYRIWNPFRSKLAA +LGG++ I++KPG++VLYLGAASGT+VSHV+DIVGP G VYAVEFSHRSGRDL+NMA +RTNVIPI+EDAR P YRML+ MVDVIF+DVAQPDQARI+ +NA Sbjct: 79 KVIVEPHRHKGVFVARGGKEDLLATVNLVPGESVYGEKRISVENASKEEGGASTKTEYRIWNPFRSKLAAGILGGLETIYMKPGSKVLYLGAASGTSVSHVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARIVGINA 252
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 3.470e-67 Identity = 122/166 (73.49%), Postives = 147/166 (88.55%), Query Frame = 3 Query: 288 KVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 K ++ HR EGVFI KG+++ALVTKN GE+VYNEKR+SV+ E+G K+EYR+WNP+RSK+AAAV+GG+ +I IKPG++VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRDLVNMAKKRTNV+PII DAR P +YR LVGMVDV+F+DVAQPDQARI+ +N Sbjct: 64 KTIIVKHRLEGVFICKGQQEALVTKNFFPGESVYNEKRMSVE-ENGEKIEYRVWNPYRSKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMN 228
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 6.124e-64 Identity = 121/169 (71.60%), Postives = 143/169 (84.62%), Query Frame = 3 Query: 285 SKVVVEPH-RHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 +KV+VE H RHEGVFI +GKE++L T N V GE+VY EKR+SV E K EYRIWNPFRSK+AA + GVD I IKPG++VLY+GAASGTT+SHVSDIVGP GVVY +E SHR GRDL+ MAKKRTNVIPIIEDARHP KYRML+GMVDV+F+DVAQP+QA+I+A N+ Sbjct: 95 AKVIVEKHPRHEGVFIVRGKEESLATLNSVPGESVYGEKRVSV-GEGEDKKEYRIWNPFRSKIAAGLHRGVDEIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPIIEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNS 262 The following BLAST results are available for this feature:
BLAST of CX047013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047013 ID=CX047013; Name=CX047013; organism=Citrus sinensis; type=EST; length=789bpback to top |