CX047013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METM5 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=flpA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.125e-32 Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 + TK+L+ G+ VY EK + N +EYR+WNP +SKL AA++ G+ + IK G +VLYLGA++GTT SHV+DI N +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA Sbjct: 25 IATKSLIPGKRVYGEKLVYSDN-----IEYRVWNPNKSKLGAAIINGLKKMPIKKGTKVLYLGASAGTTPSHVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNA 164
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METMP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis GN=flpA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.181e-32 Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 + TK+LV G+ VY EK + + +EYRIWNP +SKL AA++ G+ + IK G +VLYLGA++GTT SHV+DI N +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA Sbjct: 25 IATKSLVPGKRVYGEKLVYSDS-----IEYRIWNPNKSKLGAAIINGLKKMPIKKGEKVLYLGASAGTTPSHVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNA 164
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METM7 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=flpA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.181e-32 Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 + TK+LV G+ VY EK + + +EYR+WNP +SKL AA++ G+ + IK G +VLYLGA++GTT SHV+DI N +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA Sbjct: 25 IATKSLVPGKRVYGEKLVYSDS-----IEYRVWNPNKSKLGAAIINGLKKMPIKKGTKVLYLGASAGTTPSHVADIA-ENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNA 164
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METJA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanocaldococcus jannaschii GN=flpA PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.181e-32 Identity = 72/146 (49.32%), Postives = 104/146 (71.23%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 + TK++V G+ VY+EK I + +E EYRIWNP +SKLAAA++ G+ + IK +++LYLGA++GTT SHV+DI G+VYA+E++ R R+L++ +R N+IPI+ DA P +Y +V VDVI+ DVAQP+QA IL NA Sbjct: 25 IATKSIVKGKKVYDEKIIKIGDE-----EYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILIKNA 164
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METM6 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=flpA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.073e-32 Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 + TK+LV G+ VY EK + N +EYR+WNP +SKL AA++ G+ + IK G +VLYLGA++GTT SHV+DI +VYA+EF+ R R+ ++ +R N+IP++ DA P Y +V VDVIF DVAQP+QA IL NA Sbjct: 25 IATKSLVPGKRVYGEKLVYSDN-----IEYRVWNPNKSKLGAAIINGLKKMPIKKGTKVLYLGASAGTTPSHVADI-AETSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNA 164
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_SULTO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus tokodaii GN=flpA PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31 Identity = 77/146 (52.74%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 L TKNL G +VY E+ V+ VEYR WN FRSKL A+L G+ I G +VLYLGAASGTT SHVSDIV G VY VEFS R R+ + +A+ R N+ PI+ DAR P YR LV VDV++ D+AQPD+ I NA Sbjct: 27 LCTKNLAPGFSVYGERLFKVEG-----VEYREWNAFRSKLGGAILKGLKQNPIVKGTKVLYLGAASGTTPSHVSDIVELEGKVYGVEFSPRVVREFLLVAQHRPNLFPILADARFPQYYRTLVEDVDVLYVDIAQPDETDIAIYNA 167
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METWO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium wolfei GN=flpA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31 Identity = 75/157 (47.77%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 315 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 +GVFI + D+LVT NL G VY EK I EYR+W+P RSK+AAAVL G+ + P +RVLYLGA++GTT SH+SDIV G VY VEFS R R+L+ + + R N++P++EDA P Y +V D+++ DVAQPDQ + N Sbjct: 9 DGVFIMR---DSLVTVNLTPGVRVYGEKLIEWGGS-----EYRVWDPRRSKMAAAVLNGLRGFQLNPESRVLYLGASAGTTASHISDIV-TMGRVYCVEFSPRMMRELIEVCRVRGNMVPLLEDASRPLDYMRMVENADLVYCDVAQPDQTGLFIRN 156
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_META3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=flpA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31 Identity = 73/146 (50.00%), Postives = 102/146 (69.86%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 + TK+LV + +Y EK I+ ++ +EYRIWNP RSKL AA++ G+ + IK G++VLYLG ++GTT SHV+DI N VY+VEF+ R R+ ++++K R N+IPI+ DA +P +Y +V VDVIF DVAQP QA IL NA Sbjct: 25 IATKSLVPSKRIYGEKLITGEDN----LEYRIWNPNRSKLGAAIVNGLKTMPIKKGSKVLYLGVSAGTTPSHVADIT-ENSPVYSVEFAPRIMREFLDVSKDRKNLIPILGDATNPVEYSNVVEEVDVIFEDVAQPKQAEILVNNA 165
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METVO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus voltae GN=flpA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.834e-31 Identity = 71/144 (49.31%), Postives = 98/144 (68.06%), Query Frame = 3 Query: 357 TKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 TK+LV + VY EK ++V+N EYR+WNP +SKL A+++ G+ + IK G++VLYLGA++GTT SHV+D V + VYAVEF+ R R+ + + R N+ PI+ DA P +Y +V VDVIF DVAQP+QA IL NA Sbjct: 25 TKSLVPNKRVYGEKLVNVKN-----TEYRVWNPNKSKLGASIINGLKEMPIKKGSKVLYLGASAGTTPSHVAD-VAEDSPVYAVEFAPRIMREFIESCEGRKNLFPILGDANKPEEYANIVEKVDVIFEDVAQPNQAEILIKNA 162
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_SULAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus acidocaldarius GN=flpA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.597e-30 Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 351 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 L TKNL G VY E+ I VEYR WN FRSKLA A++ G+ I G+++LYLGAASGTT SH+SDIV G VY+VEFS R R+L+ +A+ R N+ PI+ DAR P Y+ LV VD+++ D+AQP++ I NA Sbjct: 27 LCTKNLSPGHNVYGERLIKYGG-----VEYREWNAFRSKLAGAIVKGLKYNPIVKGSKILYLGAASGTTPSHISDIVELQGKVYSVEFSPRVIRELLLVAQYRPNMFPILADARFPQYYKSLVENVDIVYVDIAQPNETEIAMYNA 167 The following BLAST results are available for this feature:
BLAST of CX047013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047013 ID=CX047013; Name=CX047013; organism=Citrus sinensis; type=EST; length=789bpback to top |