CX047013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METTH (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium thermoautotrophicum GN=flpA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.091e-28 Identity = 71/157 (45.22%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 315 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 +GVFI ++L+T N G VY E+ I D EYR+W+P RSKLAAA+L G+ + +RVLYLGA++GTT SH+SDIV +G VY +EFS R R+L+ + + R N+ P++EDA P Y +V D+++ DVAQPDQ R+ N Sbjct: 11 DGVFIMN---NSLLTINPNPGVKVYGERII-----DWGGREYRVWDPRRSKLAAAILNGLRGFSLNSDSRVLYLGASAGTTASHISDIV-TDGRVYCIEFSPRMMRELLGVCESRKNMAPLLEDASRPLSYLRMVEAADLVYCDVAQPDQTRLFIEN 158
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_THEAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoplasma acidophilum GN=flpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.285e-25 Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 360 KNLVA-GEAVYNE--KRISVQNEDGTKVE---YRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 KN++ G +Y K V ED + E YR W P RSKLAAA+L G+ N+ I + +LYLGA++GTTVSHVSDI P+G +YAVE ++ L+++A++R N+ PI+EDA P +YR V VDVI+ D++Q +Q I N Sbjct: 19 KNMLRIGNKLYTRTSKNKKVYGEDIIRFEHANYREWRPDRSKLAAAILKGLHNMPIGESSSILYLGASTGTTVSHVSDIA-PSGRIYAVEVAYEPFSKLLDLAEQRDNIYPILEDANLPERYRFFVDHVDVIYQDISQRNQIAIFKRN 165
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_ARCFU (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Archaeoglobus fulgidus GN=flpA PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.632e-24 Identity = 68/149 (45.64%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 342 EDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 +D LVTK+ Y EK DG YR W P+RSKLAA +L G + ++ RVLYLGAASGTTVSH++DIV G++YAVE+S + L+ + ++R N+IP++ DA P KY +V VD+I+ D+AQ +Q IL NA Sbjct: 12 DDTLVTKSKYGSH--YGEKVF-----DG----YREWVPWRSKLAAMILKG-HRLKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQIEILKANA 147
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_THEVO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoplasma volcanium GN=flpA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.744e-24 Identity = 62/140 (44.29%), Postives = 87/140 (62.14%), Query Frame = 3 Query: 381 AVYNEKRIS--VQNEDGTKVE---YRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 +VY E V E+ TK+ YR W+P RSK AAA+L G+ I+ VLYLGA++GTT+SH+SDI P G +Y VE S+ L+++AKKR N+ PI+EDA P KY + VDV++ D++Q +Q +I N Sbjct: 24 SVYTETETPQRVYGEEITKINNRTYREWDPRRSKPAAAILNGLRRFPIRENDSVLYLGASTGTTISHISDIC-PAGTIYGVEVSYEPFSKLLDLAKKRNNLYPILEDANSPEKYSFFIEHVDVMYQDISQRNQIQIFKNN 162
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METMJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=flpA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.744e-24 Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 3 Query: 438 YRIWNPFRSKLAAA-VLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 YR+W+P+RSKLAA LGG + + P RVLYLGAA+GTTVSHV+D V VYAVEF+ R +DL+ +A++R N++PI+ DA P +Y + VD+++ DVAQP+Q I N Sbjct: 25 YRVWDPYRSKLAALYTLGG--GVELTPEMRVLYLGAANGTTVSHVADYVE---TVYAVEFAPRPMQDLLEVARRRRNIVPIMADASRPEEYAPFMEAVDLVYQDVAQPNQVEIAERN 136
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METTP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=flpA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.354e-23 Identity = 63/137 (45.99%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 378 EAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 E +Y EK + DG R+W+P RSKLAA +L + P +VLYLGAA+GTTVS++ DI+ G++YAVE S R+ RDL+ +A++R N+IP++ DA P YR +V VD+++ DVAQ +QA I + NA Sbjct: 24 EPLYGEKIV-----DGL----RVWDPRRSKLAALLLRYPCLEGVVPSGKVLYLGAANGTTVSYLGDIL-TGGMIYAVEISPRAMRDLLLLAEQRENIIPVLGDAARPETYRRIVEPVDLLYQDVAQRNQAEIASRNA 150
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_HALMA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Haloarcula marismortui GN=flpA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.016e-23 Identity = 66/150 (44.00%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 336 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 G E +L T+ G+ VY E+ T ++R W+P RSKL A + G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R R+L++ A+ R N+ P+++DAR P Y +V VDV+ DVA QAR+ LN Sbjct: 13 GGETSLATQ----GQPVYGER---------TDGDWRRWDPHRSKLGAMLAHGMDT-GLGGGETVLYLGAAAGTTVSHVADFGGPT---YAVEFAPRPVRELLDAAESRRNLFPLLKDARKPESYAHVVEPVDVVVQDVATRGQARVATLN 145
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_PICTO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Picrophilus torridus GN=flpA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.258e-20 Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 384 VYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 788 VY EK I +N R W+P RSKLAAA+L G + +LYLGA++GTTVSH+SDI +G +YAVE S+ S L ++++ R N+ PI+EDA +Y+ V D I+ D+AQ +Q +I NA Sbjct: 25 VYGEKIIRKKNS-----YLREWDPRRSKLAAAILKGFKHANFDKKLNILYLGASTGTTVSHLSDIC-ISGRLYAVELSYDSFVKLYSLSQARNNIFPILEDANLVERYKFFVEKCDFIYQDIAQRNQVQIFNQNA 153
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_METHJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=flpA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.063e-19 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 3 Query: 441 RIWNPFRSKLAAAVLGGVDNIWIKP---GARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 785 RIW+P SK+AA +I +P AR+LYLGAA+G+TVS +SD VVYAVEFS R R L+ +A+ R N+IP+ EDAR+P +Y V VD++ D+AQ DQA I N Sbjct: 25 RIWDPGHSKVAALC-----HIHGEPPVRNARILYLGAAAGSTVSFLSDYAE---VVYAVEFSPRPVRSLIRLARARKNIIPLFEDARYPERYLPFVEPVDLLIQDIAQRDQAEIALRN 134
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_HALLT (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=flpA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.001e-19 Identity = 66/152 (43.42%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 336 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALNA 788 G E L T+ G VY E DG +R W+P RSKL G + + G VLYLGAASGTTVSHV+D GP YAVEF+ R RDLV A+ R + P+++DAR P +Y +V VD I DVA QA + NA Sbjct: 16 GGETRLATR----GPPVYGEP-----TADG----WRAWDPGRSKLGGMFELGFET-GLSGGETVLYLGAASGTTVSHVADFAGPT---YAVEFAPRPARDLVEAAEPRDRLFPLLKDARTPKRYAHVVESDVDAIVQDVATRGQAEVAVRNA 150 The following BLAST results are available for this feature:
BLAST of CX047013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047013 ID=CX047013; Name=CX047013; organism=Citrus sinensis; type=EST; length=789bpback to top |