CX047013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_HALWD (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Haloquadratum walsbyi (strain DSM 16790) GN=flpA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.301e-17 Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 375 GEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGM-VDVIFSDVAQPDQARILALN 785 G VY E R + DG +R+W+ RSKL A ++ + G +LYLGAASGTTVSHV+D GP YA+EF+ R RDL+ +A R N+IP++ DAR P Y +V ++ + DVA QA + N Sbjct: 26 GTTVYGEPR----DTDG----WRLWDAGRSKLGAMFKLDIET-GLTGGESILYLGAASGTTVSHVADFAGPT---YAIEFAPRPVRDLLEVATTRPNLIPLLCDARQPETYAHVVETDIEYLIQDVATRGQATVALRN 151
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_HALSA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halobacterium salinarium GN=flpA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.634e-16 Identity = 62/151 (41.06%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 336 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALN 785 G ED ++ GE Y E + DG +R W+ RSKL A G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R DL+ +A R + P+++DAR P Y +V VD I DVA QA + N Sbjct: 13 GDEDGVLATR---GEPAYGEPVV-----DG----WRRWDAHRSKLGATFELGLDT-GLSGGDAVLYLGAANGTTVSHVADFAGP---TYAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIVQDVATRGQADVALSN 147
BLAST of CX047013 vs. ExPASy Swiss-Prot
Match: FLPA_HALS3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=flpA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.634e-16 Identity = 62/151 (41.06%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 336 GKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLV-GMVDVIFSDVAQPDQARILALN 785 G ED ++ GE Y E + DG +R W+ RSKL A G+D + G VLYLGAA+GTTVSHV+D GP YAVEF+ R DL+ +A R + P+++DAR P Y +V VD I DVA QA + N Sbjct: 13 GDEDGVLATR---GEPAYGEPVV-----DG----WRRWDAHRSKLGATFELGLDT-GLSGGDAVLYLGAANGTTVSHVADFAGP---TYAVEFAPRPVTDLLAVADSRERLFPLLKDARAPETYAHVVESGVDAIVQDVATRGQADVALSN 147 The following BLAST results are available for this feature:
BLAST of CX047013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047013 ID=CX047013; Name=CX047013; organism=Citrus sinensis; type=EST; length=789bpback to top |