CX047004

Overview
NameCX047004
Unique NameCX047004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.895e-27
Identity = 63/153 (41.18%), Postives = 90/153 (58.82%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGY-DGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            VPA++ FGDS VD GNN+ ++T  + +Y PYG +F     TGRFS+GK+  D  A+ LG K   PAY +     + LL G  FAS G+GY    T I    I L  QL Y+ EY  KL ++ G K++  IIK+++++V  GS D   +++  P
Sbjct:   50 VPAVIVFGDSIVDAGNNDDMITEARCDYAPYGIDFDGGVATGRFSNGKVPGDIVAEELGIKPNIPAYRNPNLKPEELLTGVTFASGGAGYVPLTTKIAVGGIPLPQQLIYFEEYIEKLKQMVGEKRTKFIIKNSLFVVICGSNDIANDFFTLP 202          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.424e-26
Identity = 60/151 (39.74%), Postives = 95/151 (62.91%), Query Frame = 2
Query:   83 AIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSI-INHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            A   FGDS VD GNN++L+T  +A+  PYG ++   +PTGRFS+G  + D  ++ +G  +  P YLS   TG+NLL+GANFASAG G   +T I   + I ++ Q++Y+ +YQ +++ L G + +  ++  A+ ++  G  DF+ NYY  P
Sbjct:   29 AFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIISEAIGMPSTLP-YLSPHLTGENLLVGANFASAGIGILNDTGIQFVNIIRISKQMEYFEQYQLRVSALIGPEATQQLVNQALVLITLGGNDFVNNYYLIP 178          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.144e-26
Identity = 63/159 (39.62%), Postives = 91/159 (57.23%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKL----------AKLAGRKQSASIIKDAIYIVGTGSGDFLQNYY 523
            +PA+  FGDS  D GNNN+L T  K+NY PYG +F     TGRFS+G + +D+ A  +G K   PAYL  +    +LL G +FAS G+GY+  TS   +AI +  QL Y+++Y  K+           KLAG +++  +I   + IV  GS D +  Y+
Sbjct:  202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYF 360          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKN------LLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYY 523
            +PA+  FGDS  D GNNN+L T  K NY PYG +F     TGRFS+G++ +D+ +  LG K   PAY+  +    N      LL G +FAS G+GY   TS      ++  QL Y+++Y+ ++ KL G+K++  I+     IV  GS D +  Y+
Sbjct:  123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYF 277          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.575e-25
Identity = 70/173 (40.46%), Postives = 100/173 (57.80%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAG-RKQSASIIKDAIYIVGTGSGDFLQNYY 523
            VV ++L F F+      +A   VP    FGDS VD GNNN L++  ++NY PYG +F    PTGRFS+GK   D  A+ LGF  Y PAY  +  +G+ +L G N+ASA +G    T   +   IS + Q++ Y+   S++ +L G   ++A  +K  IY VG GS D+L NY+
Sbjct:   10 VVLVLLCFGFSV--VKAQAQAQVPCFFVFGDSLVDNGNNNGLISIARSNYFPYGIDF--GGPTGRFSNGKTTVDVIAELLGFNGYIPAY--NTVSGRQILSGVNYASAAAGIREETGRQLGQRISFSGQVRNYQTTVSQVVQLLGDETRAADYLKRCIYSVGLGSNDYLNNYF 176          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.686e-25
Identity = 63/174 (36.21%), Postives = 99/174 (56.90%), Query Frame = 2
Query:   20 LVLAFAFASKGYAQEAAP-----LVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSA-SIIKDAIYIVGTGSGDFLQNYY 523
            ++LAF+F S  Y   A        V A+ +FGDS +D GNNN LL+  K N+ PYGR+FI  + TGRF +G++ +D  A+ LG K   PAY        +L  G  FAS GSG D  T+    +I ++ Q+  ++ Y ++L  + G ++ A ++I +A+Y++  G+ D    Y+
Sbjct:    9 MLLAFSFISLFYVGNAQQSYGNSTVSALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSGLDPITARTTGSIWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVYLISAGNNDIAITYF 182          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: EXL4_ARATH (GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana GN=EXL4 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.984e-25
Identity = 58/152 (38.16%), Postives = 89/152 (58.55%), Query Frame = 2
Query:   80 PAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPS 535
            PA+++FGDS +D GNNN LLT+ K N  PYGR F   + TGRF +G++ +D  A+ LG K   PAY     +  +L  G  FAS G+G D  TS +   ++   Q+  ++ Y  KL   AG  +++SI+ +A+ +V  G+ D   +Y+  P+
Sbjct:   27 PALLAFGDSILDTGNNNFLLTFMKGNIWPYGRSFSMRRATGRFGNGRVFSDIVAEGLGIKKILPAYRKLFNSPSDLRTGVCFASGGAGVDPVTSKLLRVLTPKDQVNDFKGYIRKLKATAGPSRASSIVSNAVILVSQGNNDIGISYFGTPT 178          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24
Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 2
Query:   83 AIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSI-INHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            A + FGDS VD GNN+ L T  +A+  PYG +F  H+PTGRFS+G  + D  ++ LG ++  P YLS       LL GANFASAG G   +T I   + I +T QL+Y+ +Y+ +++ L G ++   ++  A+ ++  G  DF+ NYY  P
Sbjct:   30 AFLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLISEHLGQESPMP-YLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKVRVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVP 179          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24
Identity = 63/160 (39.38%), Postives = 94/160 (58.75%), Query Frame = 2
Query:   50 GYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSI-INHAISLTHQLQYYREYQSKLAKLAGRKQSAS-IIKDAIYIVGTGSGDFLQNYY 523
            G+  +A P VP    FGDS VD GNNN L +  +A+Y PYG +F    PTGRFS+G+   D   + LGF  Y PAY  S  +G+ +L G N+ASA +G    T   +   I+ + Q++ Y+   +++ ++ G + +A+  +K  IY VG GS D+L NY+
Sbjct:   21 GFKVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYFPYGIDF--GGPTGRFSNGRTTVDVLTELLGFDNYIPAY--STVSGQEILQGVNYASAAAGIREETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAADYLKRCIYSVGMGSNDYLNNYF 176          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.970e-24
Identity = 56/148 (37.84%), Postives = 93/148 (62.84%), Query Frame = 2
Query:   83 AIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSI-INHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYY 523
            A   FGDS VD GNNN+L+T  +A+ PPYG ++   +PTGRFS+G  + D  ++ +G +   P  LS + TG+ LLIGANFASAG G   +T +   + + +  Q + ++EYQ +++++ G  ++  ++  A+ ++  G  DF+ NY+
Sbjct:   31 AFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIGSEPTLP-ILSPELTGEKLLIGANFASAGIGILNDTGVQFLNILRIGRQFELFQEYQERVSEIIGSDKTQQLVNGALVLMTLGGNDFVNNYF 177          
The following BLAST results are available for this feature:
BLAST of CX047004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
EXL1_ARATH4.895e-2741.18GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
LTL1_ARATH1.424e-2639.74GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
APG_ARATH4.144e-2639.62Anter-specific proline-rich protein APG OS=Arabido... [more]
APG_BRANA9.231e-2638.71Anther-specific proline-rich protein APG (Fragment... [more]
GDL15_ARATH1.575e-2540.46GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GDL30_ARATH2.686e-2536.21GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
EXL4_ARATH5.984e-2538.16GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana ... [more]
GDL79_ARATH2.274e-2440.40GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL14_ARATH2.274e-2439.38GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL67_ARATH2.970e-2437.84GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11E10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11E10-J20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047004 ID=CX047004; Name=CX047004; organism=Citrus sinensis; type=EST; length=538bp
CAGGAAAACAGTTGTGTTTTTGGTGCTGGCATTTGCATTTGCAAGCAAAG
GGTACGCACAAGAGGCAGCGCCTCTTGTTCCTGCAATCGTAAGTTTTGGT
GATTCTTCAGTAGATGTTGGCAACAACAATCATCTTCTCACCTATTTCAA
GGCCAATTACCCTCCTTATGGAAGAGAGTTTATCGATCATCAACCTACTG
GAAGATTTTCCGATGGGAAATTAGTCACTGACTTCACTGCTGATACCCTA
GGCTTTAAGACTTATGCGCCTGCATATCTTAGCTCACAAGCTACAGGGAA
AAACCTCCTTATTGGGGCCAACTTTGCTTCAGCTGGATCTGGTTATGATG
GCAATACATCCATCATAAACCATGCAATTTCATTGACTCACCAATTGCAG
TACTATAGAGAGTACCAGAGTAAGCTAGCAAAGTTAGCGGGTCGCAAACA
ATCGGCTTCCATAATCAAGGATGCAATATACATAGTGGGGACTGGGAGTG
GTGACTTTCTTCAAAATTACTATGCCAAACCATCGCTT
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