CX047004

Overview
NameCX047004
Unique NameCX047004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.640e-24
Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 2
Query:   14 VFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLS-SQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSA-SIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            +F++  F+      A E      A+ +FGDS +D GNNN LLT  K NY PYG  F    PTGRF +G++ TD  A+ L  K   PAY    + + ++L  G  FAS GSG D  TS     +S   Q++ +++Y  KL ++  RK+    I+ +A++++  G+ D    Y+  P+L
Sbjct:    6 IFVLSLFSIYVLSSAAEKNTSFSALFAFGDSVLDTGNNNFLLTLLKGNYWPYGLSFDYKFPTGRFGNGRVFTDIVAEGLQIKRLVPAYSKIRRISSEDLKTGVCFASGGSGIDDLTSRTLRVLSAGDQVKDFKDYLKKLRRVVKRKKKVKEIVSNAVFLISEGNNDL--GYFVAPAL 180          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.283e-23
Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 2
Query:   50 GYAQE--AAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSA-SIIKDAIYIVGTGSGDFLQNY 520
            GYAQ+   +  V A+ +FGDS +D GNNN+L T  K N+ PYGR FI  + TGRF +G++ +D  A+ L  K   PAY     +  +L  G  FAS GSG D  T+     I +  Q++ ++EY  KL  +   K+   +II +A+Y++  G+ D    Y
Sbjct:   22 GYAQQFSGSVAVSALFAFGDSILDTGNNNNLNTLSKCNFFPYGRNFIGGKATGRFGNGRVFSDMIAEGLNVKKLLPAYRDPNLSKNDLPTGVCFASGGSGLDERTARSQGVIWVPDQVKDFKEYIMKLNGVVRDKRKVNAIISNAVYLISAGNNDLAITY 181          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 4.288e-23
Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 2
Query:   65 AAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNT-SIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYY 523
            A   +PA   FGDS VD GNNN+L T  KANY P G +F    PTGRF++G+ + D     LG     P YL+   +G  +L G N+AS GSG   +T  +    I++  QL  +   +  +    G  ++A + + AI+ V TGS D + NY+
Sbjct:   24 AGKKIPANFVFGDSLVDAGNNNYLATLSKANYVPNGIDF--GSPTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIFSVTTGSNDLINNYF 175          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: EXL5_ARATH (GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana GN=EXL5 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 7.314e-23
Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2
Query:   80 PAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTD---------------FTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGD 505
            PA+++FGDS VD GNNN+LLT  K NY PYG  F    PTGRF +G++ +D                +A+ LG K   PAY        +L  G +FAS G+G D  TS +   +S   Q++ ++ Y+ KL  + GR ++  I+ +++ +V  G+ D
Sbjct:   28 PALLAFGDSMVDTGNNNYLLTLMKGNYWPYGWNFDSKIPTGRFGNGRVFSDVVGIILKSSLQCFFVISAEGLGIKRIVPAYRKLYIAPSDLKTGVSFASGGAGVDPVTSKLLRVLSPADQVKDFKGYKRKLKGVVGRSKAKKIVANSVILVSEGNND 184          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL65_ARATH (GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.553e-23
Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAG-RKQSASIIKDAIYIVGTGSGDFLQNYY 523
            V  +++A A A         P+ P    FGDS VD GNNN L +  +ANY PYG +F  + PTGRFS+GK   D   + LGF  Y   Y  S+A G+++L G N+ASA +G    T   +   I+   Q+  +    S++  + G   ++A+ +   IY +G GS D+L NY+
Sbjct:    4 VCVMMMAMAIAMAMNIAMGDPIAPCYFIFGDSLVDSGNNNRLTSLARANYFPYGIDF-QYGPTGRFSNGKTTVDVITELLGFDDYITPY--SEARGEDILRGVNYASAAAGIREETGRQLGARITFAGQVANHVNTVSQVVNILGDENEAANYLSKCIYSIGLGSNDYLNNYF 173          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.629e-22
Identity = 58/177 (32.77%), Postives = 97/177 (54.80%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            V + ++ F  A    + E   + PA+  FGDS VD GNNNHL +  ++NY PYG +F  +QPTGRFS+GK + DF  + LG     PA++ +   G ++L G N+ASA  G    T   +    S+  Q++ + +   ++++   ++     +  ++ +V  G+ D++ N Y KP L
Sbjct:   25 VPWFLVVFVLAGGEDSSETTAMFPAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPE-IPAFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVVSLGNNDYINN-YLKPRL 199          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.779e-22
Identity = 64/182 (35.16%), Postives = 103/182 (56.59%), Query Frame = 2
Query:    2 RKTVVFL-VLAFAFASKGYAQEAAP----LVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQ--PTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSG-YDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASII-KDAIYIVGTGSGDFLQNY 520
            +K++ F+ VL   F    +++ A+      + A   FGDS VD GNNN+L T  +AN PP G +F   +  PTGRF++G+ + D   + LG ++YA  YL+  A+G+ LL G N+AS G G  +   S+  + + +  Q+ Y+   + +  KL G+ ++   I K +++ V  GS DFL NY
Sbjct:    2 KKSIFFVPVLVLFFFGSRFSRVASAGDQRALAASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLFSVVIGSNDFLNNY 183          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.525e-20
Identity = 60/153 (39.22%), Postives = 83/153 (54.25%), Query Frame = 2
Query:   71 PLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAGRKQSAS-IIKDAIYIVGTGSGDFLQNYY 523
            P+ P    FGDS VD GNNN L +  +ANY PYG +F    PTGRFS+G    D  A  LGF+ Y   Y S  A G+++L G N+ASA +G    T   +   I+   Q+  +    S++  + G +  AS  +   IY +G GS D+L NY+
Sbjct:   25 PIAPCYFIFGDSLVDNGNNNQLQSLARANYFPYGIDFA-AGPTGRFSNGLTTVDVIAQLLGFEDYITPYAS--ARGQDILRGVNYASAAAGIRDETGRQLGGRIAFAGQVANHVNTVSQVVNILGDQNEASNYLSKCIYSIGLGSNDYLNNYF 174          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 50/151 (33.11%), Postives = 85/151 (56.29%), Query Frame = 2
Query:   95 FGDSSVDVGNNNHLLTYFKANYPPYGREFI--DHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSII-NHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            FGDS VDVGNNN++ T  KA+  PYG +F   + QPTGRF++G+ ++D   + LG K+  P YL        +  G N+AS  +G   +T ++    + L  Q+  + + +  + ++ G   +  ++K+A++ +  GS D L   Y +PS+
Sbjct:   29 FGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTITIGSNDILN--YIQPSI 177          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.876e-19
Identity = 54/146 (36.99%), Postives = 81/146 (55.48%), Query Frame = 2
Query:   95 FGDSSVDVGNNNHLLTYFKANYPPYGREF--IDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAGRKQSAS-IIKDAIYIVGTGSGDFLQNY 520
            FGDS VD GNNN+L T  +AN  P G +F      PTGRF++G+ + D   + LG   YA  +L+  A GK LL G N+AS G G    T  I  + + +  Q+ ++   + +   L G++++   I K +I+ +  G+ DFL NY
Sbjct:   52 FGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIFSITIGANDFLNNY 197          
The following BLAST results are available for this feature:
BLAST of CX047004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
EXL6_ARATH8.640e-2435.59GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL5_ARATH3.283e-2338.13GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
GDL64_ARATH4.288e-2337.66GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
EXL5_ARATH7.314e-2336.31GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana ... [more]
GDL65_ARATH9.553e-2336.42GDSL esterase/lipase At4g18970 OS=Arabidopsis thal... [more]
GDL75_ARATH1.629e-2232.77GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL58_ARATH2.779e-2235.16GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL82_ARATH1.525e-2039.22GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]
GDL81_ARATH2.876e-1933.11GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL38_ARATH2.876e-1936.99GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11E10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11E10-J20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047004 ID=CX047004; Name=CX047004; organism=Citrus sinensis; type=EST; length=538bp
CAGGAAAACAGTTGTGTTTTTGGTGCTGGCATTTGCATTTGCAAGCAAAG
GGTACGCACAAGAGGCAGCGCCTCTTGTTCCTGCAATCGTAAGTTTTGGT
GATTCTTCAGTAGATGTTGGCAACAACAATCATCTTCTCACCTATTTCAA
GGCCAATTACCCTCCTTATGGAAGAGAGTTTATCGATCATCAACCTACTG
GAAGATTTTCCGATGGGAAATTAGTCACTGACTTCACTGCTGATACCCTA
GGCTTTAAGACTTATGCGCCTGCATATCTTAGCTCACAAGCTACAGGGAA
AAACCTCCTTATTGGGGCCAACTTTGCTTCAGCTGGATCTGGTTATGATG
GCAATACATCCATCATAAACCATGCAATTTCATTGACTCACCAATTGCAG
TACTATAGAGAGTACCAGAGTAAGCTAGCAAAGTTAGCGGGTCGCAAACA
ATCGGCTTCCATAATCAAGGATGCAATATACATAGTGGGGACTGGGAGTG
GTGACTTTCTTCAAAATTACTATGCCAAACCATCGCTT
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