CX047004

Overview
NameCX047004
Unique NameCX047004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.887e-16
Identity = 57/175 (32.57%), Postives = 81/175 (46.29%), Query Frame = 2
Query:   14 VFLVLAFAFASKGYAQEA-APLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKP 532
            ++++LA  FA    A        P    FGDS  D GNNN L T  K NY PYG ++    PTGRFS+G+ + D  A+  GF    P +  +     N  IG N+AS   G    TS  +   ISL  Q+       +  + +       S ++  +Y +  GS D+L NY+  P
Sbjct:    9 LWIILATVFAVAAVAPAVHGQQTPCYFVFGDSVFDNGNNNALNTKAKVNYLPYGIDYF-QGPTGRFSNGRNIPDVIAELAGFNNPIPPFAGASQAQAN--IGLNYASGAGGIREETSENMGERISLRQQV------NNHFSAIITAAVPLSRLRQCLYTINIGSNDYLNNYFLSP 174          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.929e-15
Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHL-LTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLI--GANFASAGSGYDGNTS-IINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNY 520
            V+F+VLA      GY  +    +     FGDS  DVGNN +L  +   AN P YG +F +  P GRF++G+ V+D   D +G     P      +  +++++  G N+AS G G    T        SL  Q++ ++  Q  +    G+K++    +DA Y+V  GS DF+ NY
Sbjct:    8 VLFIVLAI----NGYDCKIVQFI-----FGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPR--PVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINNY 170          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.520e-15
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 2
Query:   62 EAAPLVPAIVSFGDSSVDVGNNNHLLTYF-KANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQAT----GKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREY--QSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYY 523
            +++  VPAI +FGDS  D GNN++      +A++PPYG  F  H+PTGRF++G+ V DF ++ +G     P +L  Q        N   G NFASAGSG   +T+       +  QLQ ++    Q+ + K        SII+++++++ TGS D   NY+
Sbjct:   24 KSSSTVPAIFTFGDSIFDAGNNHYNKNCTAQADFPPYGSSFF-HRPTGRFTNGRTVADFISEFVGLPLQKP-FLELQIQILNGTSNFSNGINFASAGSGLLLDTNKFMGVTPIQTQLQQFQTLVEQNLIEK--------SIIQESLFLLETGSNDIF-NYF 173          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.575e-15
Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = 2
Query:   83 AIVSFGDSSVDVGNNNHL--LTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLL-IGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            A+  FGDS  D GNNN++  L  F++NY PYG+      PTGR SDG+ + DF A+   +    PAYL   + GKN    G +FASAG+G    T      I+L  QL  +++ +  L    G  Q   +I  A+Y+   G  D+   +    S+
Sbjct:   39 ALFVFGDSVFDAGNNNYIDTLPSFRSNYWPYGQTTFKF-PTGRVSDGRTIPDFIAE-YAWLPLIPAYL-QPSNGKNQFPYGVSFASAGAGALVGT-FPGMVINLKSQLNNFKKVEKLLRSTLGEAQGKMVISRAVYLFHIGVNDYQYPFSTNSSI 189          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.575e-15
Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSG-YDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNY 520
            VPA+   GDS VD GNNN L T  +AN+ PYG + +++QPTGRFS+G    D  A  L   +  P +     +G  +L G N+ASA +G  D +        SL  Q+       S+L  +   +     +  ++ ++  GS D++ NY
Sbjct:   39 VPAMFVLGDSLVDAGNNNFLQTVARANFLPYGID-MNYQPTGRFSNGLTFIDLLARLLEIPS-PPPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNY 185          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.639e-14
Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHL-LTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKN------LLIGANFASAGSG-YDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNY 520
            +P +  FGDS VD GNNN+L ++  KANYP  G +F + +PTGRF +GK   D  A+  G     P YLS +   K        + G NFAS G+G ++ +   +  AI L+ Q+  +     ++ KL        + K +++ V  GS D    +
Sbjct:   37 IPGLYVFGDSLVDAGNNNYLPISISKANYPHNGVDFPNKKPTGRFCNGKNAADAIAEKFGL-PLPPPYLSLRGLLKREKRKSAAVTGVNFASGGAGIFNSSDQKLGQAIPLSKQVNNWLSIHEEVMKLEPSAAQLHLSK-SLFTVVIGSNDLFDYF 190          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 6.206e-14
Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 2
Query:   83 AIVSFGDSSVDVGNNNHL--LTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNT---SIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPS 535
            A+ +FGDS  + GNNN+   ++ F++N+ PYG+      PTGR SDG+++ DF A+   +    P  L    +   L  G NFA+  +G    T   S+ N +  L  QL  ++  +  L    G  ++  +I  A+Y+   G+ D+   ++A  S
Sbjct:   37 ALFAFGDSLFEAGNNNYFDSISSFRSNFWPYGKTTFKF-PTGRVSDGRIMIDFIAE-YAWLPLIPPNLQPGYSNSQLTYGLNFATTAAGVFAGTFPGSVTNLSKDLGTQLNNFKNVEKTLRSNLGDAEARRVISKAVYLFHIGANDYQYPFFANTS 190          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 2
Query:   77 VPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSG 343
            +PA   FGDS V+VGNNN+L T  KAN  P G +F    PTGRF++G+ + D     LG     P YL+    G  +L GAN+A  GSG
Sbjct:   28 IPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDF--GSPTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSG 114          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13
Identity = 50/154 (32.47%), Postives = 73/154 (47.40%), Query Frame = 2
Query:   83 AIVSFGDSSVDVGNNNHL--LTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSIINHAISLTHQLQYYREYQSKLAKLAGRKQSASIIKDAIYIVGTGSGDFLQNYYAKPSL 538
            A+  FGDS  D GNNN++  L+  ++NY PYG+      PTGR SDG+L+ DF A+   +    P  L           G NFAS G+G    T      I+L  QL  +++ +  L    G  +   +I  A+Y+   G  D+   +    SL
Sbjct:   37 ALFVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQTTFK-SPTGRVSDGRLIPDFIAE-YAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGALVGT-FSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSL 187          
BLAST of CX047004 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.406e-12
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 2
Query:   11 VVFLVLAFAFASKGYAQEAAPLVPAIVSFGDSSVDVGNNNHLLTYFKANYPPYGREFIDHQPTGRFSDGKLVTDFTADTLGFKTYAPAYLSSQATGKNLLIGANFASAGSGYDGNTSII 367
            ++ L       S  YA E     PAI +FGDS+ D G       ++  N PPYG  F  H+ TGR+SDG+L+ DF A++      +P YLSS   G N   GA+FA+AGS     T+II
Sbjct:   11 IITLSFLLCMLSLAYASETCDF-PAIFNFGDSNSDTGGK--AAAFYPLN-PPYGETFF-HRSTGRYSDGRLIIDFIAESFNLPYLSP-YLSS--LGSNFKHGADFATAGSTIKLPTTII 121          
The following BLAST results are available for this feature:
BLAST of CX047004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
GDL68_ARATH3.887e-1632.57GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GDL31_ARATH1.929e-1532.18GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GLIP6_ARATH2.520e-1535.40GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GLIP2_ARATH9.575e-1535.48GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GDL28_ARATH9.575e-1533.56GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL87_ARATH3.639e-1433.33GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]
GRIP4_ARATH6.206e-1430.13GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GDL63_ARATH1.059e-1346.07GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GLIP1_ARATH6.862e-1332.47GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
EST_HEVBR3.406e-1240.34Esterase OS=Hevea brasiliensis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11E10_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11E10-J20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047004 ID=CX047004; Name=CX047004; organism=Citrus sinensis; type=EST; length=538bp
CAGGAAAACAGTTGTGTTTTTGGTGCTGGCATTTGCATTTGCAAGCAAAG
GGTACGCACAAGAGGCAGCGCCTCTTGTTCCTGCAATCGTAAGTTTTGGT
GATTCTTCAGTAGATGTTGGCAACAACAATCATCTTCTCACCTATTTCAA
GGCCAATTACCCTCCTTATGGAAGAGAGTTTATCGATCATCAACCTACTG
GAAGATTTTCCGATGGGAAATTAGTCACTGACTTCACTGCTGATACCCTA
GGCTTTAAGACTTATGCGCCTGCATATCTTAGCTCACAAGCTACAGGGAA
AAACCTCCTTATTGGGGCCAACTTTGCTTCAGCTGGATCTGGTTATGATG
GCAATACATCCATCATAAACCATGCAATTTCATTGACTCACCAATTGCAG
TACTATAGAGAGTACCAGAGTAAGCTAGCAAAGTTAGCGGGTCGCAAACA
ATCGGCTTCCATAATCAAGGATGCAATATACATAGTGGGGACTGGGAGTG
GTGACTTTCTTCAAAATTACTATGCCAAACCATCGCTT
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