CX046964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_ACOAM (50S ribosomal protein L16, chloroplastic OS=Acorus americanus GN=rpl16 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37 Identity = 76/98 (77.55%), Postives = 81/98 (82.65%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EP+WITSRQIEAGRRAM R RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWV+VVKPGRILYEM GV+E KMPIRTQFII+G Sbjct: 38 EPSWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPAETRMGSGKGSPEYWVSVVKPGRILYEMGGVSETVARAAIEIAASKMPIRTQFIIAG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK14_ANGEV (50S ribosomal protein L14, chloroplastic OS=Angiopteris evecta GN=rpl14 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37 Identity = 73/95 (76.84%), Postives = 88/95 (92.63%), Query Frame = -1 Query: 2 MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKG 286 MIQPQ++LNVADNSGAR+LMCIR++G S+R YA GDVIVAV+KEAVPN PL++SEV+RAV+VRTCKEL+RDNGM IR+DDNAAVVI+ EGNP+G Sbjct: 1 MIQPQSYLNVADNSGARKLMCIRVLGTSDREYADTGDVIVAVVKEAVPNMPLKKSEVVRAVVVRTCKELKRDNGMRIRFDDNAAVVINQEGNPRG 95
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_CUSEX (50S ribosomal protein L16, plastid OS=Cuscuta exaltata GN=rpl16 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 76/97 (78.35%), Postives = 79/97 (81.44%), Query Frame = -1 Query: 419 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIIS 709 EPAW+TSRQIEAGRRAM RN RRGGKIWVRIFPDKPVT+RP ETRMGSGKG PEYWVAVVKPGRILYEM GV + KMPIRTQFIIS Sbjct: 38 EPAWLTSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGCPEYWVAVVKPGRILYEMGGVTKKIARRAFSIAASKMPIRTQFIIS 134
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_CALFG (50S ribosomal protein L16, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl16 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = -1 Query: 419 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIIS 709 EP+WITSRQIEAGRRAM R RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWV+VVKPGRILYEM GV+E KMPIRTQFII+ Sbjct: 38 EPSWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVSVVKPGRILYEMGGVSETVARAAISIAACKMPIRTQFIIA 134
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK14_ZYGCR (50S ribosomal protein L14, chloroplastic OS=Zygnema circumcarinatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 69/95 (72.63%), Postives = 90/95 (94.74%), Query Frame = -1 Query: 2 MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKG 286 MIQPQ++LNVADNSGAR+LMCIR++G+SNR+YAHIGD+++AV+KE VPN PL++SE++RAVIVRT K L+RDNGM++R+DDNAAVVI+ EGNP+G Sbjct: 1 MIQPQSYLNVADNSGARKLMCIRVLGSSNRKYAHIGDMVIAVVKETVPNMPLKKSEIVRAVIVRTRKGLKRDNGMVLRFDDNAAVVINQEGNPRG 95
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_PIPCE (50S ribosomal protein L16, chloroplastic OS=Piper cenocladum GN=rpl16 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.123e-37 Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM R RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWV+VVKPGRILYE+ G++E KMPIRTQF+I+G Sbjct: 38 EPAWITSRQIEAGRRAMARYARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVSVVKPGRILYEIGGISETVARAAISIAASKMPIRTQFVIAG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_NANDO (50S ribosomal protein L16, chloroplastic OS=Nandina domestica GN=rpl16 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.123e-37 Identity = 74/98 (75.51%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGR++M R RRGGKIW+RIFPDKPVT+RPTETRMGSGKGSPEYWV+VVKPGRILYEM GV+E KMPIRTQF+I+G Sbjct: 38 EPAWITSRQIEAGRKSMARYARRGGKIWIRIFPDKPVTVRPTETRMGSGKGSPEYWVSVVKPGRILYEMGGVSEIAAREAISIAASKMPIRTQFVIAG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_SORBI (50S ribosomal protein L16, chloroplastic OS=Sorghum bicolor GN=rpl16 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37 Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = -1 Query: 425 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFI 709 EPAWIT+RQIEAGRRAM R RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV+E KMPIR+QF+ Sbjct: 38 EPAWITARQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVSETVARAAISIAASKMPIRSQFL 132
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_SACOF (50S ribosomal protein L16, chloroplastic OS=Saccharum officinarum GN=rpl16 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37 Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = -1 Query: 425 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFI 709 EPAWIT+RQIEAGRRAM R RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV+E KMPIR+QF+ Sbjct: 38 EPAWITARQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVSETVARAAISIAASKMPIRSQFL 132
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_SACHY (50S ribosomal protein L16, chloroplastic OS=Saccharum hybrid GN=rpl16 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.385e-37 Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = -1 Query: 425 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFI 709 EPAWIT+RQIEAGRRAM R RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV+E KMPIR+QF+ Sbjct: 38 EPAWITARQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVSETVARAAISIAASKMPIRSQFL 132 The following BLAST results are available for this feature:
BLAST of CX046964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046964 ID=CX046964; Name=CX046964; organism=Citrus sinensis; type=EST; length=709bpback to top |