CX046964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_EUCGG (50S ribosomal protein L16, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl16 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41 Identity = 84/98 (85.71%), Postives = 85/98 (86.73%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_MANES (50S ribosomal protein L16, chloroplastic OS=Manihot esculenta GN=rpl16 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.113e-41 Identity = 84/98 (85.71%), Postives = 84/98 (85.71%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_CARPA (50S ribosomal protein L16, chloroplastic OS=Carica papaya GN=rpl16 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.113e-41 Identity = 83/98 (84.69%), Postives = 85/98 (86.73%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EP WITSRQIEAGRRAM RN+RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAEN KMPI+TQFIISG Sbjct: 38 EPTWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENIARRAISIAASKMPIKTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_CUCSA (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus GN=rpl16 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.759e-41 Identity = 84/98 (85.71%), Postives = 84/98 (85.71%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAEN KMPIRTQFI SG Sbjct: 38 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENIARKAISIAASKMPIRTQFITSG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK14_LEMMI (50S ribosomal protein L14, chloroplastic OS=Lemna minor GN=rpl14 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.604e-41 Identity = 86/95 (90.53%), Postives = 90/95 (94.74%), Query Frame = -1 Query: 2 MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKG 286 MIQPQT LNVADNSGARELMCIRI+GASNRRYA+IGDVIVAVIKEAVPN PLERSEVIRAVIVRT KEL+R+NGM IRYDDNAAVVID EGNPKG Sbjct: 1 MIQPQTLLNVADNSGARELMCIRILGASNRRYANIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTRKELKRENGMRIRYDDNAAVVIDQEGNPKG 95
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_MORIN (50S ribosomal protein L16, chloroplastic OS=Morus indica GN=rpl16 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.028e-41 Identity = 82/98 (83.67%), Postives = 84/98 (85.71%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKP+T+RPTETRMGSGKGSPEYWVAVVKPGRILYEMSGV EN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPITVRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVPENIARKAIAIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_SPIOL (50S ribosomal protein L16, chloroplastic OS=Spinacia oleracea GN=rpl16 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.789e-40 Identity = 82/98 (83.67%), Postives = 84/98 (85.71%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPGRILYE+SGVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARRAVAIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_LOTJA (50S ribosomal protein L16, chloroplastic OS=Lotus japonicus GN=rpl16 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.336e-40 Identity = 81/98 (82.65%), Postives = 85/98 (86.73%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGG+IWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPG+I+YEM GVAEN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKIVYEMGGVAENIARKAISIAASKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_SOYBN (50S ribosomal protein L16, chloroplastic OS=Glycine max GN=rpl16 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.984e-40 Identity = 81/98 (82.65%), Postives = 84/98 (85.71%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RNVRRGG+IWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPG+ILYEM GV EN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIISG 135
BLAST of CX046964 vs. ExPASy Swiss-Prot
Match: RK16_DAUCA (50S ribosomal protein L16, chloroplastic OS=Daucus carota GN=rpl16 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.204e-40 Identity = 81/98 (82.65%), Postives = 82/98 (83.67%), Query Frame = -1 Query: 416 EPAWITSRQIEAGRRAMPRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXKMPIRTQFIISG 709 EPAWITSRQIEAGRRAM RN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPGRILYEM GV EN KMPIRTQFIISG Sbjct: 38 EPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISIASSKMPIRTQFIISG 135 The following BLAST results are available for this feature:
BLAST of CX046964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046964 ID=CX046964; Name=CX046964; organism=Citrus sinensis; type=EST; length=709bpback to top |