CX046963

Overview
NameCX046963
Unique NameCX046963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_CANFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Canis familiaris GN=DLD PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.352e-68
Identity = 120/187 (64.17%), Postives = 150/187 (80.21%), Query Frame = -3
Query:  256 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 816
            GR PFT  LGL+++G+E D  GRIPVN RF T IP +YAIGDV+ GPMLAHKAE++G+ CVE +AG    +DY+ VP V+YTHPEVA VGK+EEQ+KE G+EY+VGKFPF ANSRAK   D +G+VKIL +K TD++LG HI+ P AGE+++EA LA+ Y AS EDIARVCHAHPT+SEA +EA +A
Sbjct:  314 GRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVPIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 500          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_YEAST (Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LPD1 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.377e-68
Identity = 119/194 (61.34%), Postives = 153/194 (78.87%), Query Frame = -3
Query:  235 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 816
            GR P+ AGLG +KIG+E DK GR+ ++++F +  P +  +GDV  GPMLAHKAEE+G+A VE L   HGHV+Y+ +P V+Y+HPEVA VGKTEEQ+KE G++Y++GKFPF ANSRAK   D EG VKIL + +T++ILG HI+ PNAGE+I EA LA+ Y AS+ED+ARVCHAHPT+SEA KEA MA +DK IH
Sbjct:  305 GRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAYDKAIH 498          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_DICDI (Dihydrolipoyl dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=lpd PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.377e-68
Identity = 117/195 (60.00%), Postives = 152/195 (77.95%), Query Frame = -3
Query:  232 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 816
            GR P T+GLGL+ +G+ TDK GR+ V + F T +P ++AIGD I GPMLAHKAEE+G+A +E +    GHV+Y  +P ++YTHPEVA VGKTEE++++ G++Y +G+FPF+ANSRAK  DD EG VK LA K++D++LG HIM  NAGELI E VLA+ Y AS EDIAR CH HPT+SEA+KEAAM  +DKPIH+
Sbjct:  294 GRRPNTSGLGLESVGIPTDKAGRVEVGDHFNTKVPSIFAIGDAIRGPMLAHKAEEEGIAIIEQIHNGGGHVNYGAIPSIIYTHPEVAWVGKTEEELQKEGIQYNIGRFPFVANSRAKTNDDVEGFVKFLAAKDSDRVLGAHIMGTNAGELIGECVLAMEYGASCEDIARTCHGHPTLSEAVKEAAMDAYDKPIHM 488          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_TRYCR (Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.839e-66
Identity = 125/195 (64.10%), Postives = 151/195 (77.44%), Query Frame = -3
Query:  235 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 816
            GR PFT GLGLDKI V  ++ G + + + F T+IP VYAIGDV+  GPMLAHKAE++GVAC E LAGK GHV+Y  +P V+YT PEVASVGK+EE++K+ GV Y+VGKFPF ANSRAKA+   +G VK+L +K TD+ILGVHI+   AGELI EA LA+ Y ASSED+ R CHAHPTMSEALKEA MA   K I+
Sbjct:  282 GRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEEELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMALVAKTIN 476          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_TRYBB (Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.137e-66
Identity = 123/195 (63.08%), Postives = 152/195 (77.95%), Query Frame = -3
Query:  235 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 816
            GR P+TAGLGL+K  V  ++ G + +   F TN+ GVYAIGDV+  GPMLAHKAE++GVAC E LAG+ GHV+YD +PGV+YT PEVASVGKTEE++K+ GV Y+VGKFPF ANSRAKA+   +G VK+L +K TD+ILGVHI+   AGELI  A+LA+ Y ASSED+ R CHAHPTMSEA+KEA MA   K I+
Sbjct:  284 GRRPYTAGLGLEKNNVSLNERGFVKIGSHFETNVAGVYAIGDVVDKGPMLAHKAEDEGVACAEILAGRPGHVNYDVIPGVIYTMPEVASVGKTEEELKKAGVAYKVGKFPFNANSRAKAVATEDGFVKVLTDKATDRILGVHIVCSAAGELIAGALLAMEYGASSEDVGRTCHAHPTMSEAVKEACMACFAKTIN 478          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_RHOCA (Dihydrolipoyl dehydrogenase OS=Rhodobacter capsulatus GN=lpd PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.318e-64
Identity = 114/194 (58.76%), Postives = 151/194 (77.84%), Query Frame = -3
Query:  235 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 816
            GR PFT GLGL+ +GVE    G++  +  +ATN+PG+YAIGD I GPMLAHKAE++G+A  E +AGKHGHV+YD +PGV+YT PEVA+VGKTE+ +K+ G  Y+VGKF F+ N RAKA+  AEG VKILA+  TD+ILG HI+ P+AG++IHE  +A+ + AS++D+A  CHAHPT SEA++EAA+A  D  IH
Sbjct:  260 GRKPFTKGLGLEALGVEMLPRGQVKADSHWATNVPGLYAIGDAIVGPMLAHKAEDEGMAVAEVIAGKHGHVNYDVIPGVIYTTPEVAAVGKTEDALKQEGRAYKVGKFSFMGNGRAKAVFQAEGFVKILADAATDRILGAHIIGPSAGDMIHEICVAMEFGASAQDLALTCHAHPTYSEAVREAALACGDGAIH 453          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 5.537e-63
Identity = 114/195 (58.46%), Postives = 149/195 (76.41%), Query Frame = -3
Query:  235 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH-DKPIH 816
            GR P+T GLGLDK+G+  DK  R+ ++  + TNIP +  IGD   GPMLAHKAE++G+A VE++A   GHV+Y+ +P V+YTHPEVA VG TE++ KE G++YR+G FPF ANSRAK   DA+G+VK++ + ETD++LGVH++ P AGELI EA LA+ Y AS+ED+ARVCHAHPT+SEA KEA MA    K IH
Sbjct:  316 GRVPYTEGLGLDKLGISMDKSNRVIMDSEYRTNIPHIRVIGDATLGPMLAHKAEDEGIAAVEYIAKGQGHVNYNCIPAVMYTHPEVAWVGITEQKAKESGIKYRIGTFPFSANSRAKTNMDADGLVKVIVDAETDRLLGVHMIGPMAGELIGEATLALEYGASAEDVARVCHAHPTLSEATKEAMMAAWCGKSIH 510          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_MANSE (Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.537e-63
Identity = 115/195 (58.97%), Postives = 147/195 (75.38%), Query Frame = -3
Query:  235 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATH-DKPIH 816
            GR P+T  LGLDK+G+  D  GR+PVN +F T +PG+YAIGDVI GPMLAHKAE++G+ CVE + G   H +YD +P V+YT PEV  V KTEE +K+ G  Y+V KFPFLANSRAK   + +G VK+L++K TD ILG HI+ P  GELI+EAVLA  Y A++ED+ARVCHAHPT +EAL+EA +A +  KPI+
Sbjct:  302 GRRPYTKDLGLDKVGIALDDRGRVPVNNKFQTTVPGIYAIGDVIHGPMLAHKAEDEGIVCVEGIKGMPVHFNYDAIPSVIYTSPEVGWVRKTEEDLKKEGKAYKVRKFPFLANSRAKTNGEPDGFVKVLSDKATDVILGTHIIGPGGGELINEAVLAQEYGAAAEDVARVCHAHPTCAEALREANLAAYCGKPIN 496          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH_RALEH (Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhL PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 4.107e-58
Identity = 107/195 (54.87%), Postives = 148/195 (75.90%), Query Frame = -3
Query:  232 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 816
            GR P T  LGLD +G+  D+ G I V++  AT +PG++AIGDV+ GPMLAHKAE++GVA  E +AG+  H+DY+ VP V+YT PE+A VGKTE Q+K  G EY+ G+FPF+AN RA  +  A+G VK+LA+ +TD+ILGVHI+A NA +LI EAV+A+ + A+SEDI RVCH HP+MSE ++EAA+A   + +++
Sbjct:  280 GRVPNTDNLGLDAVGLAADQRGFIEVDDHCATKVPGLWAIGDVVRGPMLAHKAEDEGVAVAERIAGQKPHIDYNCVPWVIYTFPEIAWVGKTEAQLKAEGREYKAGQFPFMANGRALGMGHADGFVKMLADAKTDEILGVHIVAANASDLIAEAVVAMEFKAASEDIGRVCHPHPSMSEVMREAALAVDKRQLNM 474          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEPU (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putida GN=lpd3 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.943e-56
Identity = 103/186 (55.38%), Postives = 139/186 (74.73%), Query Frame = -3
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAM 816
            GR P+T GL L+ +G+ETDK G +       T++PGV+ IGDV  GPMLAHKAE++ VAC+E +AGK   V+Y+ +PGV+YT PE+A+VGKTEEQ+K  G  Y+VGKFPF ANSRAK   + EG  K++A+ ETD++LGVH++ P+  E+I E  +A+ + AS+EDIA  CH HPT SEAL++AAM
Sbjct:  273 GRRPYTKGLNLESVGLETDKRGML-AQRTPPTSVPGVWVIGDVTSGPMLAHKAEDEAVACIERIAGKPHEVNYNLIPGVIYTRPELATVGKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADAETDEVLGVHLVGPSVSEMIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAM 457          
The following BLAST results are available for this feature:
BLAST of CX046963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
DLDH_CANFA3.352e-6864.17Dihydrolipoyl dehydrogenase, mitochondrial OS=Cani... [more]
DLDH_YEAST4.377e-6861.34Dihydrolipoyl dehydrogenase, mitochondrial OS=Sacc... [more]
DLDH_DICDI4.377e-6860.00Dihydrolipoyl dehydrogenase, mitochondrial OS=Dict... [more]
DLDH_TRYCR1.839e-6664.10Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi G... [more]
DLDH_TRYBB3.137e-6663.08Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei ... [more]
DLDH_RHOCA1.318e-6458.76Dihydrolipoyl dehydrogenase OS=Rhodobacter capsula... [more]
DLDH_SCHPO5.537e-6358.46Dihydrolipoyl dehydrogenase, mitochondrial OS=Schi... [more]
DLDH_MANSE5.537e-6358.97Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 ... [more]
DLDH_RALEH4.107e-5854.87Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha ... [more]
DLDH3_PSEPU2.943e-5655.38Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11C07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C07-F14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046963 ID=CX046963; Name=CX046963; organism=Citrus sinensis; type=EST; length=818bp
TTTTTTTTTAGCTCAAGTCAATGTATCTCTCAATTATTATTTTGCGCATC
AAAACATAACAAAAGAAACCCAAGTTATTCCATCATCATATAAACATATA
AATGAGGAAAAACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGGACAA
TTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTCAAAC
AAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTTGTCG
TGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGATGTGC
ATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATGGCCA
GGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATGAACC
CCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTCCTTC
AGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAATTTCC
CCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTTCCCA
ACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTATCATA
GTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACCCCAT
CCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCCAATC
GCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTATCCG
TCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCAGCGG
TGAATGGAGTCCGGCCAG
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