CX046963

Overview
NameCX046963
Unique NameCX046963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 57/182 (31.32%), Postives = 88/182 (48.35%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKA-EEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELG-VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR P T  LGL+ +GV+  K G I V+E   T++P ++A+GDV     L   A  E G       A +    DY  VP  V++ P +  VG  EEQ +KE G V+     F  L  + +   D     +K++   +T K+LG+H+   +A E++    +A+    +  D       HPT +E
Sbjct:  347 GRRPNTKNLGLETVGVKMTKNGAIEVDEYSRTSVPSIWAVGDVTDRINLTPVALMEGGALAKTIFAHEPTKPDYRNVPAAVFSQPPIGQVGLMEEQAIKEFGDVDVYTANFRPLKATISGLPDRV--FMKLIVCAKTSKVLGLHMCGDDAPEIVQGFAIAVKAGLTKADFDATVGIHPTSAE 526          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: TRXR2_RAT (Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus GN=Txnrd2 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15
Identity = 61/186 (32.80%), Postives = 92/186 (49.46%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVETD-KMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEG---IVKILAEKETDK-ILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR P T  L L+K GV T+ K  +I V+ + AT++P +YAIGDV  G P L   A + G    + L GK   + +Y  VP  V+T  E   VG +EE+   L  +  +  +          + D +     +K++  +E  + +LG+H + PNAGE+     L I   AS   + +    HPT SE
Sbjct:  319 GRVPETRNLNLEKAGVNTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMNYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHIEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIQCGASYAQVMQTVGIHPTCSE 504          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHR_STRTR (Glutathione reductase OS=Streptococcus thermophilus GN=gor PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK--HGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR   T+G GL+K GVE  + G I  +E   T++PG+YA+GDV     L   A + G    E L        +DY  V  VV++HP + ++G TEE+ + + G E  +V K  F     A   +     +K++   E +KI+G+H +     E+I    +AI   A+  D       HPT SE
Sbjct:  262 GRAANTSGFGLEKTGVELTERGNIYSDEFENTSVPGIYALGDVTGKLDLTPVAVKAGRQLSERLFNNKVDAKLDYTDVATVVFSHPAIGAIGLTEEKAIAKYGAENIKVYKSSFTPMYTALGDNRQLSTMKLVTLGEDEKIIGLHGIGYGVDEMIQGFSVAIKMGATKADFDNTVAIHPTGSE 444          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHRP_PEA (Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum GN=GR PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15
Identity = 58/185 (31.35%), Postives = 88/185 (47.57%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSR-----AKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR+P T  LGL+ +GV+  K G I V+E   T++P ++AIGD      L   A  +GVA  + L   +    DY  +P  V++ P +  VG TEEQ  E   +  V    F AN R        + D    +K++   ET+ +LG+H+   +A E+     + I    +  D       HPT +E
Sbjct:  341 GRSPNTKDLGLESVGVKVAKDGSIEVDEYSQTSVPSIWAIGDATNRVNLTPVALMEGVALAKTLFQNEPTKPDYRAIPSAVFSQPPIGGVGLTEEQAAEQYGDIDV----FTANFRPMKATLSGLPD-RVFMKLIVSAETNVVLGLHMCGEDAAEIAQGFAVGIKAGLTKADFDATVGIHPTAAE 520          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHR_KLULA (Glutathione reductase OS=Kluyveromyces lactis GN=GLR1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15
Identity = 56/182 (30.77%), Postives = 93/182 (51.10%), Query Frame = -3
Query:  274 GLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTE-EQVKELG---VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 795
            GLGL+ IGV+ D   +I V+E   +++  VY++GDV+    L   A   G      L G    K+   DY+ VP VV++HPE  S+G +E E +++ G   V+    KF  +  +  +  D      K++   E +K++G+HI+  ++ E++    +AI   A+  D       HPT +E L
Sbjct:  299 GLGLENIGVKLDAKEQIVVDEYQNSSVKNVYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFKNQKQDYENVPSVVFSHPEAGSIGLSEREAIEKFGKDNVKVYNSKFNAMYYAMMEEKDKTPTRYKLVCTGEEEKVVGLHIIGDSSAEILQGFGVAIKMGATKADFDSCVAIHPTSAEEL 480          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHR_ECOLI (Glutathione reductase OS=Escherichia coli (strain K12) GN=gor PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15
Identity = 55/183 (30.05%), Postives = 87/183 (47.54%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGK--HGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL--GVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR P    + L+  GV+T++ G I V++   TNI G+YA+GD      L   A   G    E L       H+DY  +P VV++HP + +VG TE Q +E     + +V K  F A   A         +K++     +KI+G+H +     E++    +A+   A+ +D       HPT +E
Sbjct:  262 GREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAE 444          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHR_YEAST (Glutathione reductase OS=Saccharomyces cerevisiae GN=GLR1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.615e-15
Identity = 51/180 (28.33%), Postives = 92/180 (51.11%), Query Frame = -3
Query:  274 GLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTE-EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 795
            G+G + +G++ +   +I  +E   TN+P +Y++GDV+    L   A   G      L G    ++  +DY+ VP V+++HPE  S+G +E E +++ G E  +V    F A   A   + +    KI+     +K++G+HI+  ++ E++    +AI   A+  D       HPT +E L
Sbjct:  300 GMGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEEL 479          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.615e-15
Identity = 57/182 (31.32%), Postives = 92/182 (50.55%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELG-VEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR P T  LGL+ +GV+  K G I V+E   T++P ++A+GDV     L   A  +G A  + L   +    DY  VP  V++ P + +VG TEEQ +++ G V+     F  L  + +   D     +K++    T+K+LGVH+   ++ E+I    +A+    +  D       HPT +E
Sbjct:  355 GRKPNTKNLGLENVGVKMAKNGAIEVDEYSQTSVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQNEPTKPDYRAVPCAVFSQPPIGTVGLTEEQAIEQYGDVDVYTSNFRPLKATLSGLPDRV--FMKLIVCANTNKVLGVHMCGEDSPEIIQGFGVAVKAGLTKADFDATVGVHPTAAE 534          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15
Identity = 55/186 (29.57%), Postives = 92/186 (49.46%), Query Frame = -3
Query:  280 GRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRV---GKFPFLANSRAKAIDDAEGIVKILAE-KETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 816
            GR   T  +GL+ +GV+  +K G+IPV +   TN+P +YAIGD++ G + L   A + G    + L  G +   DYD VP  V+T  E    G +EE+  E   E  +     F +       + D+ +   KI+   K+ ++++G H++ PNAGE+      A+    + + +      HP  +E
Sbjct:  406 GRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDDERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAE 591          
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: GSHR_ASHGO (Glutathione reductase OS=Ashbya gossypii GN=GLR1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15
Identity = 53/180 (29.44%), Postives = 88/180 (48.89%), Query Frame = -3
Query:  274 GLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE-YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 795
            G+  + +GV+  + G + V+E   T+  G+YA+GDV+    L   A   G      L G    +    DYD VP VV++HPE  S+G TE Q ++  G E  ++ +  F A   A   D +    K++     +K++G+HI+   + E++    +AI   A+  D       HPT +E +
Sbjct:  297 GIAPENVGVKLGETGHVVVDEYQNTSTKGIYALGDVVGNMELTPVAIAAGRKLANRLFGPEQMRAQKQDYDNVPSVVFSHPEAGSIGLTEPQAIERYGKENIKIYQTKFTAMYYAMLEDKSPTKYKLICAGPEEKVVGLHIVGDGSAEILQGFGVAIKMGATKADFDSCVAIHPTSAEEI 476          
The following BLAST results are available for this feature:
BLAST of CX046963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
GSHRP_TOBAC8.663e-1631.32Glutathione reductase, chloroplastic (Fragment) OS... [more]
TRXR2_RAT1.478e-1532.80Thioredoxin reductase 2, mitochondrial OS=Rattus n... [more]
GSHR_STRTR1.478e-1532.79Glutathione reductase OS=Streptococcus thermophilu... [more]
GSHRP_PEA1.478e-1531.35Glutathione reductase, chloroplastic/mitochondrial... [more]
GSHR_KLULA2.520e-1530.77Glutathione reductase OS=Kluyveromyces lactis GN=G... [more]
GSHR_ECOLI4.299e-1530.05Glutathione reductase OS=Escherichia coli (strain ... [more]
GSHR_YEAST5.615e-1528.33Glutathione reductase OS=Saccharomyces cerevisiae ... [more]
GSHRP_ARATH5.615e-1531.32Glutathione reductase, chloroplastic OS=Arabidopsi... [more]
TRXR1_MOUSE7.333e-1529.57Thioredoxin reductase 1, cytoplasmic OS=Mus muscul... [more]
GSHR_ASHGO7.333e-1529.44Glutathione reductase OS=Ashbya gossypii GN=GLR1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11C07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C07-F14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046963 ID=CX046963; Name=CX046963; organism=Citrus sinensis; type=EST; length=818bp
TTTTTTTTTAGCTCAAGTCAATGTATCTCTCAATTATTATTTTGCGCATC
AAAACATAACAAAAGAAACCCAAGTTATTCCATCATCATATAAACATATA
AATGAGGAAAAACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGGACAA
TTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTCAAAC
AAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTTGTCG
TGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGATGTGC
ATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATGGCCA
GGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATGAACC
CCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTCCTTC
AGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAATTTCC
CCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTTCCCA
ACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTATCATA
GTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACCCCAT
CCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCCAATC
GCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTATCCG
TCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCAGCGG
TGAATGGAGTCCGGCCAG
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