CX046963

Overview
NameCX046963
Unique NameCX046963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALPK (Soluble pyridine nucleotide transhydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALPC (Soluble pyridine nucleotide transhydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALPB (Soluble pyridine nucleotide transhydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALPA (Soluble pyridine nucleotide transhydrogenase OS=Salmonella paratyphi A GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALG2 (Soluble pyridine nucleotide transhydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALEP (Soluble pyridine nucleotide transhydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_SALCH (Soluble pyridine nucleotide transhydrogenase OS=Salmonella choleraesuis GN=sthA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ETD  G++ VN  + T +P VYA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +    G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_KLEP7 (Soluble pyridine nucleotide transhydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.091e-26
Identity = 70/190 (36.84%), Postives = 110/190 (57.89%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG++TD  G++ VN  + T +P +YA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +  + G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDTLALENIGLQTDSRGQLKVNSMYQTALPHIYAVGDVIGYPSLASAAYDQGRIAAQALVKGEASAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMSVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_KLEP3 (Soluble pyridine nucleotide transhydrogenase OS=Klebsiella pneumoniae (strain 342) GN=sthA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.091e-26
Identity = 70/190 (36.84%), Postives = 110/190 (57.89%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG++TD  G++ VN  + T +P +YA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +  + G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDTLALENIGLQTDSRGQLKVNSMYQTALPHIYAVGDVIGYPSLASAAYDQGRIAAQALVKGEASAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMSVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
[Close]
BLAST of CX046963 vs. ExPASy Swiss-Prot
Match: STHA_ENT38 (Soluble pyridine nucleotide transhydrogenase OS=Enterobacter sp. (strain 638) GN=sthA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.861e-26
Identity = 70/190 (36.84%), Postives = 109/190 (57.37%), Query Frame = -3 
Query:  259 GRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIH--EAVLAINYDASS-EDIARVCHAHPTMSEALKEAAM 816
            GRT  T  L L+ IG+ TD  G++ VN  + T +P +YA+GDVI  P LA  A + G +A    + G+      + +P  +YT PE++SVGKTE+Q+  + V Y VG+  F   +RA+ +  + G +KIL  +ET +ILG+H     A E+IH  +A++      ++ E        +PTM+EA + AA+
Sbjct:  270 GRTGNTDSLALENIGLTTDSRGQLKVNSMYQTALPHIYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTSMKVPYEVGRAQFKHLARAQIVGMSVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAAL 459
The following BLAST results are available for this feature:
BLAST of CX046963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
STHA_SALPK8.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_SALPC8.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_SALPB8.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_SALPA8.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_SALG28.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_SALEP8.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_SALCH8.352e-2737.89Soluble pyridine nucleotide transhydrogenase OS=Sa... [more]
STHA_KLEP71.091e-2636.84Soluble pyridine nucleotide transhydrogenase OS=Kl... [more]
STHA_KLEP31.091e-2636.84Soluble pyridine nucleotide transhydrogenase OS=Kl... [more]
STHA_ENT381.861e-2636.84Soluble pyridine nucleotide transhydrogenase OS=En... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11C07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11C07-F14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046963 ID=CX046963; Name=CX046963; organism=Citrus sinensis; type=EST; length=818bp
TTTTTTTTTAGCTCAAGTCAATGTATCTCTCAATTATTATTTTGCGCATC
AAAACATAACAAAAGAAACCCAAGTTATTCCATCATCATATAAACATATA
AATGAGGAAAAACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGGACAA
TTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTCAAAC
AAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTTGTCG
TGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGATGTGC
ATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATGGCCA
GGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATGAACC
CCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTCCTTC
AGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAATTTCC
CCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTTCCCA
ACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTATCATA
GTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACCCCAT
CCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCCAATC
GCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTATCCG
TCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCAGCGG
TGAATGGAGTCCGGCCAG
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