CX046951

Overview
NameCX046951
Unique NameCX046951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23
Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            AFQLY+SG+ TG CG SLDHGV  VGYG+ +G DYWI++NSWG +WG+ GY++++RN+     GKCGIAM  SY
Sbjct:  274 AFQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPF-GKCGIAMMPSY 346          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G AF+ Y SGIFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  267 GDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G AF+ Y SGIFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SY
Sbjct:  267 GDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSY 340          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23
Identity = 49/76 (64.47%), Postives = 54/76 (71.05%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQLY SGIFTG C  S +H +T VGYGTEN  D+WIVKNSWG +WGE GYIR ERN+     GKCGI   ASY
Sbjct:  140 GRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENP-DGKCGITRFASY 214          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22
Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G AF  Y  G+FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  276 GKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22
Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G AF  Y  G+FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASY
Sbjct:  276 GKAFMFYSEGVFTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASY 351          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22
Identity = 50/77 (64.94%), Postives = 54/77 (70.13%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQ Y  G+FTG CGT LDHGV  VGYGT  +G  YW VKNSWG  WGE GYIRMER ++    G CGIAMEASY
Sbjct:  265 GSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDK-EGLCGIAMEASY 340          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.089e-22
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQ Y SGIFTG CGT+ +HGV  VGYGT++G +YWIV+NSWG +WG  GYI MERNVA +  G CGIA   SY
Sbjct:  137 GAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASS-AGLCGIAQLPSY 211          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.015e-21
Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQ Y+ G+F G+CGT LDHGV AVGYG+  G+DY IVKNSWG  WGE G+IRM+RN  G   G CGI   ASY
Sbjct:  276 GRDFQFYKGGVFNGKCGTDLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRN-TGKPEGLCGINKMASY 350          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.848e-21
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQ Y  G+FTG C T L+HGV  VGYGT  +G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM ASY
Sbjct:  267 GSDFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNIS-KKEGLCGIAMMASY 342          
The following BLAST results are available for this feature:
BLAST of CX046951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CPR1_ARATH4.289e-2360.81Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
ACTN_ACTDE5.602e-2365.79Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH5.602e-2365.79Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPGP2_ZINOF9.555e-2364.47Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSP2_HORVU1.248e-2264.94Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU2.129e-2264.94Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CYSEP_RICCO2.129e-2264.94Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
ERVB_TABDI8.089e-2263.16Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
XCP1_ARATH4.015e-2161.84Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSEP_VIGMU6.848e-2161.04Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B12-D24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046951 ID=CX046951; Name=CX046951; organism=Citrus sinensis; type=EST; length=818bp
GTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAGATGT
GGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCAGGTGGATGGTCTGTTAAATATTTATTCGGACGTTGGTTTTGTAT
ATAGCGTTGTAAGTTATCTATCTGCGTTGAATCCGAACAATGCACAAACA
AATTGGTGTTATCTATTT
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