CX046951

Overview
NameCX046951
Unique NameCX046951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = 3
Query:    9 AFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y SG++    C  S LDH V AVGYG+E G D+W+VKNSW +SWG+ GYI+M RN        CGIA  ASY
Sbjct:  249 SFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRN----RNNNCGIATVASY 320          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 3
Query:   12 FQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F++Y+SG++T   CGTS   ++H V AVGYG ENG  YW++KNSWG+ WG+ GY +ME          CGIA  ASY
Sbjct:  287 FRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG-----KNMCGIATCASY 358          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 3
Query:    9 AFQLYESGIFTG-RCGT-SLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQLY  G++    C   +LDHGV  VGYGT E+G DYW+VKNSWG++WGE GYI+M RN       +CGIA  +SY
Sbjct:  264 SFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARN----QNNQCGIATASSY 336          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.478e-15
Identity = 44/68 (64.71%), Postives = 48/68 (70.59%), Query Frame = 3
Query:   12 FQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIA 215
            FQ Y SGIF+G CGT L+HGVT VGY     A+YWIV+NSWG  WGE GYIRM R V G   G CGIA
Sbjct:  139 FQQYSSGIFSGPCGTKLNHGVTIVGYQ----ANYWIVRNSWGRYWGEKGYIRMLR-VGG--CGLCGIA 199          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:    9 AFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y +G++    C +S LDH V AVGYG+E G D+W+VKNSW +SWGE GYI+M RN        CGIA +A Y
Sbjct:  248 SFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARN----RNNNCGIATDACY 319          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.615e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQLY +G++     +S  LDHGV AVG GT+NG DY+IVKNSWG SWG  GYI M RN        CGI+  ASY
Sbjct:  263 SFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARN----KDNNCGISTMASY 334          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.615e-15
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 3
Query:   12 FQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            FQ Y+SG+F G CGTSL+H VTA+GY    G D  I    WG+ WGE GYIRM R+V+ + +G CGIA++  Y
Sbjct:  140 FQYYKSGVFNGPCGTSLNHAVTAIGY----GQDSIIYPKKWGAKWGEAGYIRMARDVSSS-SGICGIAIDPLY 207          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.333e-15
Identity = 41/74 (55.41%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   12 FQLYESGIFTGRCGTSL--DHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEAS 227
            F +Y SGI+  +  + L  +H V AVGYGT+ G DYWIVKNSWG+ WGE GYIRM RN        CGIA  AS
Sbjct:  249 FMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRG----NMCGIASLAS 318          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 3
Query:    3 GMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            G  FQLY  GIF G CG  +DH V AVGY    G +Y ++KNSWG+ WGE GYIR++R   G   G CG+   + Y
Sbjct:  271 GKDFQLYRGGIFVGPCGNKVDHAVAAVGY----GPNYILIKNSWGTGWGENGYIRIKRG-TGNSYGVCGLYTSSFY 341          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14
Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 3
Query:   12 FQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F+LY+SG++T   CGT+   ++H V AVGYG E+G  YW++KNSWG+ WG+ GY +ME          CG+A  ASY
Sbjct:  285 FRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMG-----KNMCGVATCASY 356          
The following BLAST results are available for this feature:
BLAST of CX046951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CYSP2_HOMAM8.663e-1653.95Digestive cysteine proteinase 2 OS=Homarus america... [more]
ORYC_ORYSJ1.131e-1550.65Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATL_SARPE1.131e-1554.55Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
ERVC_TABDI1.478e-1564.71Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CYSP1_HOMAM2.520e-1552.63Digestive cysteine proteinase 1 OS=Homarus america... [more]
CYSP3_DICDI5.615e-1555.26Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
BROM2_ANACO5.615e-1553.42Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATLL_FASHE7.333e-1555.41Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
PAPA1_CARPA9.578e-1550.00Papain OS=Carica papaya PE=1 SV=1[more]
CYSP2_MAIZE1.251e-1448.05Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B12-D24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046951 ID=CX046951; Name=CX046951; organism=Citrus sinensis; type=EST; length=818bp
GTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAGATGT
GGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCAGGTGGATGGTCTGTTAAATATTTATTCGGACGTTGGTTTTGTAT
ATAGCGTTGTAAGTTATCTATCTGCGTTGAATCCGAACAATGCACAAACA
AATTGGTGTTATCTATTT
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