CX046951

Overview
NameCX046951
Unique NameCX046951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 3
Query:   12 FQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F +Y+SG+++     +    ++H V AVGYG +NG  YWIVKNSWGS+WG  GY  +ER         CG+A  ASY
Sbjct:  257 FMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERG-----KNMCGLAACASY 328          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 3
Query:    9 AFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y+SGI F   C + +LDHGV  VGYG E    N + YW+VKNSWG  WG  GY++    +A      CGIA  ASY
Sbjct:  256 SFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVK----IAKDKNNHCGIATAASY 331          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 3
Query:   12 FQLYESGIFTGR-CGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F+ Y+ G+FT   CG +   ++H V AVGYG E+   YW++KNSWG  WG+ GY +ME          CG+A  +SY
Sbjct:  283 FRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG-----KNMCGVATCSSY 354          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.608e-12
Identity = 43/95 (45.26%), Postives = 53/95 (55.79%), Query Frame = 3
Query:    9 AFQLYESGIF-TGRCGT-SLDHGVTAVGYGTENGA-------------------DYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQLY SGI+    C + +LDHGV AVGYG+ +G+                   +YWIVKNSWG+SWG  GYI M RN        CGIA  AS+
Sbjct:  251 SFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRN----RDNNCGIASSASF 341          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 3
Query:    9 AFQLYESGIFT-GRCGTSLDHGVTAVGYGTENG-ADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +F+ Y+ G+++ G CG   DH V AVGYGT     DYWIVKNSWG+ WG+ GY+ M RN        C IA  AS+
Sbjct:  323 SFRFYKDGVYSEGNCGRP-DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRG----NMCHIASAASF 393          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 41/104 (39.42%), Postives = 50/104 (48.08%), Query Frame = 3
Query:   12 FQLYESGIFTGRCGTSLDHGVTAVGYGT-----------------------EN--GAD------YWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F LY  G+F G C   L+H V  VGYG                        EN  G D      YWIV+NSWG +WGEGGYIR++RN AG   G CG+  +  +
Sbjct:  401 FVLYSGGVFDGECNPELNHSVLLVGYGQVKKSLAFEDSHSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGD-DGFCGVGSDVFF 503          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 3
Query:   63 DHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +H VTAVGYGT+ NG DYWIVKNSWG+ WGE GYI+M RN        C IA  + Y
Sbjct:  268 NHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARN----RDNNCAIATYSVY 320          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 34/67 (50.75%), Postives = 38/67 (56.72%), Query Frame = 3
Query:   21 YESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 221
            Y SGI T      L+H V  VGYG EN   YWI KNSWGS+WGE GY R  RN+       CG+  E
Sbjct:  268 YRSGIATVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNI-----NACGMLNE 329          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    9 AFQLYESGI-FTGRCGTS-LDHGVTAVGYG---TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y+SGI F   C +  LDHGV  VGYG   T++   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  256 SFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 330          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.911e-12
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 3
Query:    9 AFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  256 SFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
The following BLAST results are available for this feature:
BLAST of CX046951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CATH_RAT1.529e-1245.45Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATL2_HUMAN1.997e-1248.75Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
ALEUL_ARATH1.997e-1242.86Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CYSP5_DICDI2.608e-1245.26Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL_BRUPA4.449e-1248.68Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CYSP_PLAVN9.911e-1239.42Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CRUST_PANBO9.911e-1259.65Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATV_NPVST9.911e-1250.75Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATL1_CANFA9.911e-1248.10Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATK_PIG9.911e-1246.05Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B12-D24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046951 ID=CX046951; Name=CX046951; organism=Citrus sinensis; type=EST; length=818bp
GTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAGATGT
GGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCAGGTGGATGGTCTGTTAAATATTTATTCGGACGTTGGTTTTGTAT
ATAGCGTTGTAAGTTATCTATCTGCGTTGAATCCGAACAATGCACAAACA
AATTGGTGTTATCTATTT
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