CX046951

Overview
NameCX046951
Unique NameCX046951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 3
Query:    9 AFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++    C + +++H V AVGYG + G  +WI+KNSWG SWG  GYI M RN        CGIA  AS+
Sbjct:  255 SFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  255 SFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  255 SFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  255 SFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 3
Query:    9 AFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  256 SFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 3
Query:    9 AFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  255 SFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 3
Query:   12 FQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F +Y  GI++     +    ++H V AVGYG ENG  YWIVKNSWG  WG  GY  +ER         CG+A  ASY
Sbjct:  259 FLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERG-----KNMCGLAACASY 330          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.691e-11
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 3
Query:   12 FQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            F +Y +GI++     +    ++H V AVGYG +NG  YWIVKNSWG  WG  GY  +ER         CG+A  ASY
Sbjct:  259 FMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERG-----KNMCGLAACASY 330          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 38/80 (47.50%), Postives = 47/80 (58.75%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y+SGI+     +S  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  256 SFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CX046951 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11
Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 3
Query:    9 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 230
            +FQ Y+SGI+     +S  LDHGV  VGYG E    N + +WIVKNSWG  WG  GY++M ++        CGI+  ASY
Sbjct:  256 SFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGISTAASY 331          
The following BLAST results are available for this feature:
BLAST of CX046951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CATK_RABIT1.294e-1146.05Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_MACMU1.294e-1146.05Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.294e-1146.05Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN1.294e-1146.05Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATK_CANFA1.294e-1146.05Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_BOVIN1.294e-1146.05Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATH_PIG1.294e-1145.45Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_HUMAN1.691e-1144.16Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATL2_BOVIN2.208e-1147.50Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_PIG2.208e-1146.25Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B12-D24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046951 ID=CX046951; Name=CX046951; organism=Citrus sinensis; type=EST; length=818bp
GTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAGATGT
GGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCAGGTGGATGGTCTGTTAAATATTTATTCGGACGTTGGTTTTGTAT
ATAGCGTTGTAAGTTATCTATCTGCGTTGAATCCGAACAATGCACAAACA
AATTGGTGTTATCTATTT
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