CX046950

Overview
NameCX046950
Unique NameCX046950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = -1
Query:  669 AFQLYESGI-FTGRCGTS-LDHGVTAVGYGTEN----GADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 890
            +F  Y+ GI F   C +  +DHGV  VGYG E+     + YW+VKNSWG  WG GGYI+M ++        CGIA  ASY
Sbjct:  255 SFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKD----RRNHCGIASAASY 330          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11
Identity = 38/80 (47.50%), Postives = 47/80 (58.75%), Query Frame = -1
Query:  669 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 890
            +FQ Y+SGI+     +S  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  256 SFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = -1
Query:  678 YESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 878
            YE GI        L+H V  VGYG EN   YWI+KNSWG+ WGE G+ ++++NV       CGI  E
Sbjct:  254 YEQGIIKYCANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNV-----NACGIKNE 315          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = -1
Query:  717 YESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNV 878
            Y  GI        L+H V  VGYGTE G  YW +KNSWGS WGE GY R++RN+
Sbjct:  268 YSKGIIHFCENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNI 321          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = -1
Query:  669 AFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGAD-YWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 890
            +FQ Y+SGI+     +S  LDHGV  VGYG E   + +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  142 SFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKD----QNNHCGIATAASY 214          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = -1
Query:  669 AFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 890
            +FQ Y  G++    C   +++H V  VGYGT+ G  YWI+KNSWG SWG  GY+ + RN        CGI   AS+
Sbjct:  255 SFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARN----KNNACGITNLASF 326          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = -1
Query:  687 FQLYESGIFTGRCG-TSLDHGVTAVGYGTEN-GADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGI 887
            F  YESG++    G     H V  VGYGT++ G DYWI+KNSWG  WGE GY R+ R     +T +CGI
Sbjct:  225 FMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIR-----MTNECGI 288          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = -1
Query:  702 FQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRM--ERNVAGTLT 887
            FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+SWG+ GYI M  E N  G  T
Sbjct:  232 FQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTSWGDKGYINMVIEGNTCGVAT 299          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = -1
Query:  705 AFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTL 890
            +F  Y+SG+ T   G  L+HGV  VGY       YW++KNSWG  WGE GY+R+   V   L
Sbjct:  269 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNACL 330          
BLAST of CX046950 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11
Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = -1
Query:  705 AFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTL 890
            +F  Y+SG+ T   G  L+HGV  VGY       YW++KNSWG  WGE GY+R+   V   L
Sbjct:  270 SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNACL 331          
The following BLAST results are available for this feature:
BLAST of CX046950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CATL1_CERAE2.521e-1146.25Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATL1_BOVIN2.521e-1147.50Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATV_NPVEP3.292e-1146.27Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_NPVAH4.300e-1153.70Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATL1_SHEEP4.300e-1148.05Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATK_RAT5.616e-1143.42Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATB3_GIALA5.616e-1149.28Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
ACP2_ENTHI5.616e-1151.47Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
LMCPB_LEIME9.579e-1145.16Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI9.579e-1145.16Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B12-D24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046950 ID=CX046950; Name=CX046950; organism=Citrus sinensis; type=EST; length=890bp
TTTTTTTTTTTTTTTTCGTTAAATATCAATTCATAAAAGCCTCCGCTGAA
TGATGCCAGGGATTTGGTGGAGGACATTGGAAATAGATAACAACAATTTG
TTTGTGCATTGTTCGGATTCAACGCAAATAGATAACTTACAACGCTATAT
ACAAAACCAACGTCCGAATAAATATTTAACAGACCATCCACCTGCCGGTA
CATTAACGTTTGAAATGAAATGCAGTAAAATGAACTAAGGCCGGGGAGAA
ACTCATTCACAAGCACGAATATCTTCATCCTCCCTTCGGCCTTCCACTGC
TCTTACAGTGCCAACTATAATTAAGCACTGCTACTTCCACCTTGATTTCC
ATGAGCCCAGTAAGGTTTAGCAGGGGTGCGTCGCAATGCCCTCACTCCCA
ATGGGTTGTCCTTGCTCATCAAGCAGGTCCCAGCACGAACATTACAGATG
GGATAGTCATGTGGGCAGCAGCTATAGTGGTCATCACAGCAGGTGGCAGC
CTCAAGCGGGCAGCATCCCCATGCAAAGCAAGAGTTACCATACTCAAAGA
CACAGCAGCAAGTGTTGCTCTCAGGGCAAGAGTAATAATTGTCACACACA
GCAGGAGGCTTTGTTGGAGATGGAGGAGACGGTCCGGGGTTGGGAGGATT
TTGGCCTTTCTTTATGGGATATGAGGCCTCCATGGCAATTCCACACTTGC
CCGTGAGAGTGCCAGCCACGTTACGCTCCATCCTAATATAGCCACCCTCT
CCCCAGCTACTGCCCCATGAATTCTTCACAATCCAGTAATCAGCTCCATT
TTCTGTGCCATATCCAACAGCAGTAACACCATGGTCCAGAGATGTCCCAC
ATCTTCCCGTAAATATACCCGATTCATATAACTGGAATGC
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