CX046945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: TYPA_HELPJ (GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori J99 GN=typA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.430e-26 Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTF 644 NIRN++VIAHVDHGK+TL D L++ +G ++ D R+ D+ E ERGITI S ++YY+ T IN+ID+PGH DF EV L++ DG L++VD EGV QT+ V+++AL I P++ VNK+D+ E +E + F Sbjct: 3 NIRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLEKERGITILSKNTAIYYKDTK----------------INIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICPIVVVNKIDKPAAEPDRVVDEVFDLF 147
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_NITSB (GTP-binding protein lepA OS=Nitratiruptor sp. (strain SB155-2) GN=lepA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.985e-25 Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL D L+ G I D ++ DT E ERGITIK+ + L Y+ + G EY++NLID+PGHVDFS EV+ +L ++GAL+VVD +GV QT + AL + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLADRLIQECGAIEDRKMSD-QVMDTMDIEKERGITIKAQSVRLTYK------------KDGKEYILNLIDTPGHVDFSYEVSRSLASSEGALLVVDASQGVEAQTIANVYIALENDLELIPVINKID 133
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_DESPS (GTP-binding protein lepA OS=Desulfotalea psychrophila GN=lepA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.333e-24 Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL D ++ G+I D ++ D E ERGITIKS + L Y D G EY++NL+D+PGHVDFS EV+ AL +GAL++VD +GV QT L A+ + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLADRMIQECGVITARDFQD-QLLDNMDIERERGITIKSQTVCLPYTAKD-----------GKEYILNLVDTPGHVDFSYEVSRALTSCEGALLIVDAAQGVEAQTLANLYLAMENDLEIIPVINKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_SULDN (GTP-binding protein lepA OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=lepA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24 Identity = 61/144 (42.36%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL D ++ G ++ G +M DT E ERGITIK+ + L Y + G Y++NLID+PGHVDFS EV+ +L +DGAL++VD +GV QT + A+ + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIIQECGSVSDRELGK-QMMDTMDIEKERGITIKAQSVRLDYV------------KDGEHYILNLIDTPGHVDFSYEVSKSLASSDGALLIVDAAQGVEAQTIANVYLAMENNLTLIPVINKID 133
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_CLOPS (GTP-binding protein lepA OS=Clostridium perfringens (strain SM101 / Type A) GN=lepA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 147 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 MD K IRN S++AH+DHGKSTL D L+ G + Q + ++ DT + E ERGITIKS L Y+ G EY++NLID+PGHVDF+ EV+ +L +GA++VVD +G+ QT AL + V +NK+D Sbjct: 1 MDKKKYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREM-EQQVLDTMELEKERGITIKSQAARLIYK-----------RENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVD 137
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_CLOPE (GTP-binding protein lepA OS=Clostridium perfringens GN=lepA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 147 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 MD K IRN S++AH+DHGKSTL D L+ G + Q + ++ DT + E ERGITIKS L Y+ G EY++NLID+PGHVDF+ EV+ +L +GA++VVD +G+ QT AL + V +NK+D Sbjct: 1 MDKKKYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREM-EQQVLDTMELEKERGITIKSQAARLIYK-----------RENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVD 137
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_CLOP1 (GTP-binding protein lepA OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=lepA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.274e-24 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 147 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 MD K IRN S++AH+DHGKSTL D L+ G + Q + ++ DT + E ERGITIKS L Y+ G EY++NLID+PGHVDF+ EV+ +L +GA++VVD +G+ QT AL + V +NK+D Sbjct: 1 MDKKKYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREM-EQQVLDTMELEKERGITIKSQAARLIYK-----------RENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVD 137
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BRAJA (GTP-binding protein lepA OS=Bradyrhizobium japonicum GN=lepA PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 62/145 (42.76%), Postives = 88/145 (60.69%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVA-AAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S++AH+DHGKSTL D L+ G+ +E+AG ++ D+ E ERGITIK+ + L Y D G +Y+ NL+D+PGHVDF+ EV+ +L +G+L+VVD +GV QT + QAL V +NK+D Sbjct: 8 NIRNFSIVAHIDHGKSTLADRLIQMTGGLTDREMAGKEQVLDSMDIERERGITIKAQTVRLAYRAKD-----------GKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQALDNNHEIVPVLNKVD 141
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_ALKMQ (GTP-binding protein lepA OS=Alkaliphilus metalliredigens (strain QYMF) GN=lepA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.970e-24 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 150 DFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 D + IRN S+IAH+DHGKSTL D L+ G+I+Q ++ D + E ERGITIK I L Y+ D G +Y +NLID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + + +NK+D Sbjct: 4 DRQRKIRNFSIIAHIDHGKSTLADRLIERTGLISQREM-QAQVLDNMELERERGITIKLQSIRLIYKAKD-----------GQDYYLNLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTMANVYLALEQNLEIIPVINKID 139
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_NITHX (GTP-binding protein lepA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=lepA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24 Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA-QEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S++AH+DHGKSTL D L+ G ++ +E+AG ++ D+ E ERGITIK+ + L Y D G +Y+ NL+D+PGHVDF+ EV+ +L +G+L+VVD +GV QT + QAL V +NK+D Sbjct: 15 NIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGITIKAQTVRLNYHAKD-----------GKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQALDNNHEIVPVLNKVD 148 The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bpback to top |