CX046945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_RALSO (GTP-binding protein lepA OS=Ralstonia solanacearum GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 656 NIRN S+IAH+DHGKSTL D ++ G ++ + ++ D+ E ERGITIK+ +L Y+ D G Y +NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D D + A Q + VI Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIIQLCGGLSDREM-EAQVLDSMDIEKERGITIKAQTAALSYKARD-----------GKVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIELGVEVVPVLNKIDL----PAADPDSAIQEIEDVI 151
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_RALPJ (GTP-binding protein lepA OS=Ralstonia pickettii (strain 12J) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 656 NIRN S+IAH+DHGKSTL D ++ G ++ + ++ D+ E ERGITIK+ +L Y+ D G Y +NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D D + A Q + VI Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIIQLCGGLSDREM-EAQVLDSMDIEKERGITIKAQTAALSYKARD-----------GKVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIELGVEVVPVLNKIDL----PAADPDNAIQEIEDVI 151
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_PSEPW (GTP-binding protein lepA OS=Pseudomonas putida (strain W619) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 150 DFKHNIRNMSVIAHVDHGKSTLTDSLVA-AAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 656 D H IRN S+IAH+DHGKSTL D + G+ A+E+ + ++ D+ E ERGITIK+ ++L+Y+ D G Y +N ID+PGHVDF+ EV+ +L +GAL+VVD +GV Q+ A+ + + + +NKMD Q D + +K+I Sbjct: 3 DLSH-IRNFSIIAHIDHGKSTLADRFIQMCGGLSAREM--EAQVLDSMDLERERGITIKAHSVTLHYKALD-----------GKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTAIEQGLEVMPVLNKMDL----PQADPDRVKDEIEKII 154
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_PSEPK (GTP-binding protein lepA OS=Pseudomonas putida (strain KT2440) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 150 DFKHNIRNMSVIAHVDHGKSTLTDSLVA-AAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 656 D H IRN S+IAH+DHGKSTL D + G+ A+E+ + ++ D+ E ERGITIK+ ++L+Y+ D G Y +N ID+PGHVDF+ EV+ +L +GAL+VVD +GV Q+ A+ + + + +NKMD Q D + +K+I Sbjct: 3 DLSH-IRNFSIIAHIDHGKSTLADRFIQMCGGLSAREM--EAQVLDSMDLERERGITIKAHSVTLHYKAQD-----------GKTYQLNFIDTPGHVDFTYEVSRSLAACEGALLVVDAGQGVEAQSVANCYTAIEQGLEVMPVLNKMDL----PQADPDRVKDEIEKII 154
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_PROA2 (GTP-binding protein lepA OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN +IAH+DHGKSTL D L+ G + Q ++ D E ERGITIKS I ++++ D G Y++NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT L A+ + + +NK+D Sbjct: 11 IRNFCIIAHIDHGKSTLADRLLEVTGTL-QHNQMTAQVLDDMDLERERGITIKSHAIQMHHKAGD-----------GRAYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDATQGVEAQTIANLYLAVEAGLEIIPVINKID 141
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_LACDB (GTP-binding protein lepA OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 +L ++ D++ +IRN S++AHVDHGKST+ D ++ +++ + +M D E +RGITIK + + Y D G +Y+ +LID+PGHVDFS EV+ +L +GA++VVD +GV QT + AL + + +NK+D Sbjct: 2 DLEKLKDYQKHIRNFSIVAHVDHGKSTIADRILELTDTVSKRQLKN-QMLDDMPLERQRGITIKMNSVQVKYHAND-----------GEDYIFHLIDTPGHVDFSYEVSRSLAACEGAVLVVDASQGVQAQTLSNTYLALENDLEILPVLNKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_LACDA (GTP-binding protein lepA OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 +L ++ D++ +IRN S++AHVDHGKST+ D ++ +++ + +M D E +RGITIK + + Y D G +Y+ +LID+PGHVDFS EV+ +L +GA++VVD +GV QT + AL + + +NK+D Sbjct: 2 DLEKLKDYQKHIRNFSIVAHVDHGKSTIADRILELTDTVSKRQLKN-QMLDDMPLERQRGITIKMNSVQVKYHAND-----------GEDYIFHLIDTPGHVDFSYEVSRSLAACEGAVLVVDASQGVQAQTLSNTYLALENDLEILPVLNKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_LACBA (GTP-binding protein lepA OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 3 Query: 132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 +L ++ + + IRN S++AH+DHGKSTL D ++ I++ D ++ D E ERGITIK + L Y D G++Y +LID+PGHVDFS EV+ +L +GA++VVD +GV QT + AL + + V +NK+D Sbjct: 2 DLEKLKNHQKYIRNFSIVAHIDHGKSTLADRILELTDTISKRDMQD-QVLDDMDLERERGITIKLNAVELTYHAKD-----------GHDYEFHLIDTPGHVDFSYEVSRSLAACEGAVLVVDAAQGVEAQTLANVYLALDDDLEIVPVINKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_GRAFK (GTP-binding protein lepA OS=Gramella forsetii (strain KT0803) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 58/144 (40.28%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN +IAH+DHGKSTL D L+ G + + + ++ D+ E ERGITIKS I + Y +G E+++NLID+PGHVDFS EV+ ++ +GAL+VVD + + QT + L AL + + +NK+D Sbjct: 3 NIRNFCIIAHIDHGKSTLADRLLDFTGAVTEREKQE-QLLDSMDLERERGITIKSHAIQMDYV------------HEGEEFVLNLIDTPGHVDFSYEVSRSIAACEGALLVVDAAQSIQAQTISNLYLALENDLEIIPVLNKVD 133
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_EUBR3 (GTP-binding protein lepA OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=lepA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.380e-21 Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN +IAH+DHGKSTL D ++ G + ++ D E ERGITIKS + + Y D G EY+ NLID+PGHVDF+ EV+ +L DGA++VVD +GV QT + AL + +NK+D Sbjct: 8 IRNFCIIAHIDHGKSTLADRIIEKTGTLTSREM-QAQVLDNMDLERERGITIKSQAVRIIYTAKD-----------GEEYIFNLIDTPGHVDFNYEVSRSLAACDGAILVVDAAQGVEAQTLANVYLALDHDLDVFPVINKVD 138 The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bpback to top |