CX046945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_LACJO (GTP-binding protein lepA OS=Lactobacillus johnsonii GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 53/154 (34.42%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 +++++ D++ +IRN S++AH+DHGKST+ D ++ +++ + ++ D E +RGITIK + + Y D G Y+ +LID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 2 DIKKLQDYQKHIRNFSIVAHIDHGKSTIADRILELTDTVSERQMKN-QLLDDMPLERQRGITIKLNSVEVKYHAKD-----------GETYIFHLIDTPGHVDFSYEVSRSLAACEGALLVVDATQGVQAQTLANTYLAIDDDLEILPVINKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_LACGA (GTP-binding protein lepA OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 53/154 (34.42%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 +++++ D++ +IRN S++AH+DHGKST+ D ++ +++ + ++ D E +RGITIK + + Y D G Y+ +LID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 2 DIKKLQDYQKHIRNFSIVAHIDHGKSTIADRILELTDTVSERQMKN-QLLDDMPLERQRGITIKLNSVEVKYHAKD-----------GETYIFHLIDTPGHVDFSYEVSRSLAACEGALLVVDATQGVQAQTLANTYLAIDDDLEILPVINKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_FUSNN (GTP-binding protein lepA OS=Fusobacterium nucleatum subsp. nucleatum GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 N RN S+IAH+DHGKST+ D L+ G +++ + ++ D+ E E+GITIK+ ++L+Y+ + G EY +NLID+PGHVDF EV+ +L +GAL+VVD +GV QT + A+ + + +NK+D Sbjct: 9 NKRNFSIIAHIDHGKSTIADRLLEYTGTVSERDMKE-QILDSMDLEREKGITIKAQAVTLFYKA-----------KNGEEYELNLIDTPGHVDFIYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLAIENNLEILPIINKID 140
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_FRATW (GTP-binding protein lepA OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL+D + +++ + ++ D+ E ERGITIK+ ++L Y D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRFIQVCNGLSEREMKE-QVLDSMDIERERGITIKAQSVTLDYTARD-----------GQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVANCYTAIEQNLEVIPILNKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_FRATT (GTP-binding protein lepA OS=Francisella tularensis subsp. tularensis GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL+D + +++ + ++ D+ E ERGITIK+ ++L Y D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRFIQVCNGLSEREMKE-QVLDSMDIERERGITIKAQSVTLDYTARD-----------GQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVANCYTAIEQNLEVIPILNKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_FRATN (GTP-binding protein lepA OS=Francisella tularensis subsp. novicida (strain U112) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL+D + +++ + ++ D+ E ERGITIK+ ++L Y D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRFIQVCNGLSEREMKE-QVLDSMDIERERGITIKAQSVTLDYTARD-----------GQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVANCYTAIEQNLEVIPILNKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_FRATM (GTP-binding protein lepA OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL+D + +++ + ++ D+ E ERGITIK+ ++L Y D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRFIQVCNGLSEREMKE-QVLDSMDIERERGITIKAQSVTLDYTARD-----------GQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVANCYTAIEQNLEVIPILNKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_FRAT1 (GTP-binding protein lepA OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL+D + +++ + ++ D+ E ERGITIK+ ++L Y D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + + + +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRFIQVCNGLSEREMKE-QVLDSMDIERERGITIKAQSVTLDYTARD-----------GQTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVANCYTAIEQNLEVIPILNKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_DESRM (GTP-binding protein lepA OS=Desulfotomaculum reducens (strain MI-1) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 156 KHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 ++ IRN +IAH+DHGKSTL D ++ G ++Q + ++ D E ERGITIK + L++ D G EY +NLID+PGHVDF+ EV+ +L +GAL+VVD +G+ QT + AL + + +NK+D Sbjct: 5 QNRIRNFCIIAHIDHGKSTLADRILEETGALSQREMTE-QVLDKMDLERERGITIKLQAVRLFHRAED-----------GQEYQLNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGIEAQTLANVYLALENDLEIIPVINKID 138
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_DEIRA (GTP-binding protein lepA OS=Deinococcus radiodurans GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 61/143 (42.66%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN S+IAHVDHGKSTL D ++ G + + D + DT + E ERGITIKST I L Y G Y+ NLID+PGHVDF+ EV+ +L +G L++VD +GV QT A+ + V +NK+D Sbjct: 14 IRNFSIIAHVDHGKSTLADRILEQLGAMGERDKRDQTL-DTLELERERGITIKSTPIRLEYT-----------RENGEGYVFNLIDTPGHVDFNYEVSRSLAACEGVLLLVDASQGVEAQTIVNAYLAIDNNLEIVPVINKID 144 The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bpback to top |