CX046945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_DECAR (GTP-binding protein lepA OS=Dechloromonas aromatica (strain RCB) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVI 656 +IRN S+IAH+DHGKSTL D ++ G ++ + ++ D+ E ERGITIK+ +L Y+ D G Y +NLID+PGHVDFS EV+ +L +GAL+VVD +GV QT AL + V +NK+D D E A Q + VI Sbjct: 3 HIRNFSIIAHIDHGKSTLADRIIHLCGGLSDREM-EAQVLDSMDIERERGITIKAQTAALSYKARD-----------GKVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTALELDVEVVPVLNKIDL----PSADPENARQEIEDVI 151
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_CITK8 (GTP-binding protein lepA OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN S+IAH+DHGKSTL+D ++ G ++ + ++ D+ E ERGITIK+ ++L Y+ D G Y +N ID+PGHVDFS EV+ +L +GAL+VVD +GV QT A+ + V +NK+D Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREM-EAQVLDSMDLERERGITIKAQSVTLDYKAAD-----------GETYHLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNKID 134
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_CHLL2 (GTP-binding protein lepA OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 168 RNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 RN +IAH+DHGKSTL D L+ + + ++ D E ERGITIKS + + ++ D G EY++NLID+PGHVDFS EV+ +L +GAL++VD +GV QT L A+ + + +NK+D Sbjct: 12 RNFCIIAHIDHGKSTLADRLLEVTHTLDRTQMSSAQVLDDMDLEKERGITIKSHAVQMKFKAED-----------GQEYILNLIDTPGHVDFSYEVSRSLAACEGALLIVDATQGVEAQTIANLYLAIEAGLEIIPVMNKID 142
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACV8 (GTP-binding protein lepA OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 162 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 NIRN +IAH+DHGKSTL D L+ I Q G +M D E ERGITIKS I + YE G +Y++NLID+PGHVDFS EV+ ++ +GAL++VD +GV QT + L AL + + +NK D Sbjct: 3 NIRNFCIIAHIDHGKSTLADRLLEFTKTI-QVTEG--QMLDDMDLEKERGITIKSHAIQMEYEYG------------GEKYVLNLIDTPGHVDFSYEVSRSIAACEGALLIVDASQGVQAQTISNLYMALEHDLEIIPVLNKCD 131
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACSU (GTP-binding protein lepA OS=Bacillus subtilis GN=lepA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/149 (38.26%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 147 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 ++ + IRN S+IAH+DHGKSTL D ++ I Q + ++ D+ E ERGITIK + L Y+ D G EY+ +LID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + +NK+D Sbjct: 8 LERQSRIRNFSIIAHIDHGKSTLADRILEKTSAITQREMKE-QLLDSMDLERERGITIKLNSVQLKYKAKD-----------GEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKID 144
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACLD (GTP-binding protein lepA OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN S+IAH+DHGKSTL D ++ I Q + ++ D+ E ERGITIK + L Y+ D G EY+ +LID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + +NK+D Sbjct: 14 IRNFSIIAHIDHGKSTLADRILEKTAAITQREMKE-QLLDSMDLERERGITIKLNSVQLKYQAKD-----------GEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKID 144
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACHK (GTP-binding protein lepA OS=Bacillus thuringiensis subsp. konkukian GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN S+IAH+DHGKSTL D ++ + Q ++ D+ E ERGITIK + L Y+ D G EY+++LID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + +NK+D Sbjct: 13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACCZ (GTP-binding protein lepA OS=Bacillus cereus (strain ZK / E33L) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN S+IAH+DHGKSTL D ++ + Q ++ D+ E ERGITIK + L Y+ D G EY+++LID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + +NK+D Sbjct: 13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACCR (GTP-binding protein lepA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN S+IAH+DHGKSTL D ++ + Q ++ D+ E ERGITIK + L Y+ D G EY+++LID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + +NK+D Sbjct: 13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: LEPA_BACCQ (GTP-binding protein lepA OS=Bacillus cereus (strain Q1) GN=lepA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21 Identity = 56/143 (39.16%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 165 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMD 593 IRN S+IAH+DHGKSTL D ++ + Q ++ D+ E ERGITIK + L Y+ D G EY+++LID+PGHVDF+ EV+ +L +GA++VVD +G+ QT + AL + + +NK+D Sbjct: 13 IRNFSIIAHIDHGKSTLADRILEKTNALTQREM-KAQLLDSMDLERERGITIKLNAVQLNYKAKD-----------GEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKID 143 The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bpback to top |