CX046945

Overview
NameCX046945
Unique NameCX046945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.207e-45
Identity = 90/213 (42.25%), Postives = 138/213 (64.79%), Query Frame = 3
Query:  141 RIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLG-DVQVYPEKGTVAFSAGLHGWAFTL 776
            ++++    IRN+ + AH+DHGK+TL+D+L+A AG++++++AG   + D  + E  RGITI +   S+ +E+             G EYLINLID+PGHVDF  +VT A+R  DG ++VVD +EGV  QTETV+RQAL E+++PVL +NK+DR   EL+++ EE  + F K+I + N ++  Y  P      QV  + GTVAF +  + WA ++
Sbjct:   13 KLIEIPERIRNIDIAAHIDHGKTTLSDNLIAGAGMMSEDLAGKQLLLDYDEQEQARGITINAANASMVHEV------------DGKEYLINLIDTPGHVDFGGDVTRAMRAVDGTIIVVDSVEGVMPQTETVVRQALKEKVKPVLFINKVDRLINELKLNAEEMQKRFVKIITDVNRLITKYAPPEFSKQWQVNVQAGTVAFGSAYNNWALSV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.207e-45
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 3
Query:  117 KFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYE-DPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            K   E +  +M+    IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E  RGITI ++ +S+ +        +F  E    +YLINLID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   ELQVD +E      KVI++ N ++     +      +V    GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTTLMNDPQRIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGRQLFMDSDEEEQARGITIDASNVSMVH--------TFDNE----DYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALREHVRPVLFVNKVDRLINELQVDSQEMQVRLGKVIDHVNKLIKNMNPEKFKAGWKVDAAAGTVAFGSALYNWAISVPMMKK 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.800e-45
Identity = 98/226 (43.36%), Postives = 141/226 (62.39%), Query Frame = 3
Query:  117 KFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYE-DPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            K   E +  +M+    IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D+ ++E ERGITI S+ +S+ +   +             +YLINLID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   EL+VD +E      KVI++ N ++     +      +V    GTVAF + L+ WA ++    K
Sbjct:    5 KKMVERVTMLMNEPTKIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGRQLFMDSDEEEQERGITIDSSNVSMVHNFDN------------EDYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALREHVRPVLFVNKVDRLINELKVDSQEMQIRLGKVIDHVNKLIKNMNPEKYKEGWRVDAAAGTVAFGSALYNWAISVPMMKK 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.882e-45
Identity = 94/222 (42.34%), Postives = 143/222 (64.41%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            E+  RI++    +RN+ ++AH+DHGK+TL+D+L+A AG++++E+AG   + D  + E  RGITI            +AA+ S     QG EYLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL+++ +E  + F K+I + N +++ Y       + QV  + G VAF +  + WA ++ + A+
Sbjct:    9 EKALRIVEHTELVRNIGIVAHIDHGKTTLSDNLIAGAGMMSEELAGKQLVLDYDEQEQARGITI------------NAAVASMVHAFQGKEYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDSVEGVMPQTETVIRQALREYVKPVLFINKIDRLINELRLNSDEMQKRFTKIISDVNKLISKYAPKEFTKEWQVSVQDGKVAFGSAYNNWAISVPSMAE 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.515e-44
Identity = 94/226 (41.59%), Postives = 141/226 (62.39%), Query Frame = 3
Query:  117 KFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDV-QVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            K  AE +  +M   +NIRN+ +IAH+ HGK+TLTD+L+A AG++++E+AGD   T   + E ER +TI    +S+ +E             +G++YLINLID+PGHV+F  EVT A+R  DGA+VVVD ++G+  QTETVL+QAL E ++PVL +NK+DR   ELQ+   +  +   +++   N ++  Y      D  +V  + GTVAF + LH WA ++    K
Sbjct:    5 KTMAERVLALMGRPNNIRNIGIIAHIHHGKTTLTDNLLAGAGMLSEELAGDAMFTWWHEQEREREMTIYGAAVSMVHEY------------EGDDYLINLIDTPGHVEFGGEVTRAVRAIDGAVVVVDFVDGIMPQTETVLKQALREYVKPVLFINKVDRAIKELQLPPNKIMERLAEIVVGVNDLIERYAPEEFKDKWKVSVQNGTVAFGSALHNWALSVPYMQK 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.515e-44
Identity = 95/218 (43.58%), Postives = 141/218 (64.68%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVY-PEKGTVAFSAGLHGWAFTL 776
            E++ +IM     +RN+ +IAHVDHGK+T +D+L+A AGI++ ++AG+ R  D    E +RGIT+K+  +SLY+E             +G  Y+INLID+PGHVDFS +VT +LR+ DGA++VVD +EGV  QTETVLRQAL E +RP+L +NK+DR   EL++  +E  Q   ++I++ N  + T+  DP +    +  P KG VA  +    W  T+
Sbjct:    8 EDILKIMRNVEQVRNIGIIAHVDHGKTTTSDALLAHAGILSPKLAGEARALDYLDVEQQRGITVKAANVSLYHEY------------KGKPYVINLIDTPGHVDFSGKVTRSLRVLDGAILVVDAVEGVMTQTETVLRQALEELVRPLLFINKVDRLIKELKLSPQEIQQRIVQIIKDVNERILTFAPDPEIAKKWLLDPAKGHVALGSAKDKWGITI 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.979e-44
Identity = 94/222 (42.34%), Postives = 142/222 (63.96%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            E+  +I++    IRN+ ++AH+DHGK+TL+D+L+A AG++++E+AG   + D  + E  RGITI            +AA+ S     QG EYLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL+++ +E  + F K+I + N +++ Y       + QV  + G VAF +  + WA ++   A+
Sbjct:    9 EKALKIVEHTELIRNIGIVAHIDHGKTTLSDNLIAGAGMMSEELAGKQLVLDYDEQEQARGITI------------NAAVASMVHTFQGKEYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDSVEGVMPQTETVIRQALREHVKPVLFINKIDRLINELRLNSDEMQKRFTKIITDVNRLISKYAPQQFTKEWQVSVQDGRVAFGSAYNNWAISIPAMAE 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.584e-44
Identity = 92/216 (42.59%), Postives = 136/216 (62.96%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            +++ +M     IRNM + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G +YLINLID+PGHVDF  +VT A+R  DGA++VVD +EGV  QTETVLRQAL E ++PVL +NK+DR   EL++   E  Q F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMTQPERIRNMGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNY------------EGQDYLINLIDTPGHVDFGGDVTRAMRAIDGAIIVVDAVEGVMPQTETVLRQALREYVKPVLFINKVDRLIKELKLGPNEILQRFAKIITDVNRLIKRYAPEEFKSQWMVKVEDGSVAFGSAYYNWALSV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.584e-44
Identity = 95/222 (42.79%), Postives = 140/222 (63.06%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            E++  +M+    IRN+ + AH+DHGK+TL+D+L+A AG+I++++AGD    D  ++EAERGITI +  +S+ +E             QG  +LINLID+PGHVDF  +VT A+R  DGA+VVV  +EG+  QTETVLRQAL E+++P+L +NK+DR   EL++  EE    F K+I + N +I     +   G   V    G+VAF +  H WA ++    K
Sbjct:    9 EQVVSLMETHDQIRNIGICAHIDHGKTTLSDNLLAGAGMISKDLAGDQLALDFDEEEAERGITIYAANVSMVHEC------------QGKPHLINLIDTPGHVDFGGDVTRAMRAIDGAVVVVCAVEGIMPQTETVLRQALKEKVKPILFINKVDRLLNELKLTPEELQNRFMKIIADVNKLIEKMSPEEFKGKWVVNVMDGSVAFGSAYHNWAISVPYMQK 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.584e-44
Identity = 98/224 (43.75%), Postives = 137/224 (61.16%), Query Frame = 3
Query:  111 MVKFT-AEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVY-PEKGTVAFSAGLHGWAFTL 776
            MVKF    E+ +IM     IRN+ + AHVDHGK+TL+D+L++AAG+I++++AG     D    E +R +T+K+   SLY+E             +G  YLINLID+PGHVDF S+   ALR+ DGA+VVVD +EGV  QTE  LR AL ER+RPVL +NK+DR   EL++   E  Q   +++ + N ++ATY D       +  P KG VAF +    W  T+
Sbjct:    1 MVKFKQTSEVLKIMGNIEQIRNIGITAHVDHGKTTLSDTLLSAAGLISEKIAGQALALDYLDVEQKRQMTVKAANASLYHEY------------KGKPYLINLIDTPGHVDFQSKTIRALRVIDGAIVVVDAVEGVMTQTEMYLRVALEERVRPVLFINKIDRLIKELRLSPTEIQQRLVQIVRDVNTLIATYADKEFQKAWLLDPMKGQVAFGSARDRWGLTI 212          
The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_PICTO5.207e-4542.25Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_METMA5.207e-4543.81Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_METBF6.800e-4543.36Elongation factor 2 OS=Methanosarcina barkeri (str... [more]
EF2_THEVO8.882e-4542.34Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]
EF2_NANEQ1.515e-4441.59Elongation factor 2 OS=Nanoarchaeum equitans GN=fu... [more]
EF2_IGNH41.515e-4443.58Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_THEAC1.979e-4442.34Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_THEGJ2.584e-4442.59Elongation factor 2 OS=Thermococcus gammatolerans ... [more]
EF2_META32.584e-4442.79Elongation factor 2 OS=Methanococcus aeolicus (str... [more]
EF2_DESK12.584e-4443.75Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bp
GTTCACTCCTTTCTCTCTATTTTTACGGATTGAGACATTTGCAGTCTCTC
TCGCTCGCCGCCTTCGAAAGAAATACTGTTGTTGTTGGTAATATTTGAGA
ATCAGTCAAGATGGTGAAGTTCACAGCAGAAGAGCTCCGGCGTATTATGG
ACTTCAAACATAACATCCGCAATATGTCTGTTATTGCCCATGTTGATCAT
GGGAAGTCAACCCTTACCGACTCTCTTGTGGCTGCTGCTGGTATTATCGC
CCAAGAAGTTGCTGGCGATGTCCGTATGACAGATACTCGTCAGGATGAAG
CTGAGCGTGGTATTACAATCAAGTCTACTGGTATATCTCTCTACTACGAG
ATGACTGATGCGGCTTTGAAGAGCTTCAAGGGAGAGCGTCAAGGGAATGA
ATACCTCATCAACCTTATTGATTCCCCTGGGCACGTCGATTTCTCATCTG
AGGTTACAGCTGCCCTTCGTATCACTGATGGTGCACTTGTGGTCGTAGAC
TGCATTGAAGGTGTTTGTGTCCAAACAGAAACTGTGCTTAGACAAGCCCT
GGGTGAAAGGATTAGGCCAGTCTTGACTGTGAACAAGATGGACAGGTGCT
TCCTTGAGCTTCAGGTTGACGGTGAAGAGGCTTACCAGACTTTCCAGAAA
GTGATTGAGAATGCTAATGTCATTATGGCTACCTATGAAGATCCACTCCT
TGGCGATGTTCAGGTTTACCCTGAAAAGGGAACAGTTGCTTTCTCTGCTG
GTTTGCATGGTTGGGCTTTTACCTTGACAAATTTTGCTAAGATGTATGCA
TCCAAGTTCGGAGTTGAT
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