CX046945

Overview
NameCX046945
Unique NameCX046945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.408e-44
Identity = 95/216 (43.98%), Postives = 140/216 (64.81%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENA-NVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            +++ +M+    IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG+    D  ++EA+RGITI +  +S+ +              +GNEYLINLID+PGHVDF  +VT A+R  DGA+VVV  +EGV  QTETVLRQAL ER++PVL +NK+DR   EL++  EE    F K+I +  N+I     +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMEKYDRIRNIGICAHIDHGKTTLSDNLLAGAGMISKELAGEQLALDFDEEEAQRGITIFAANVSMVHTY------------EGNEYLINLIDTPGHVDFGGDVTRAMRAIDGAIVVVCAVEGVMPQTETVLRQALRERVKPVLFINKVDRLINELKLTPEELQSRFIKIINDINNLIRKMAPEEFKDKWLVRVEDGSVAFGSAYNNWAISV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.757e-44
Identity = 98/221 (44.34%), Postives = 139/221 (62.90%), Query Frame = 3
Query:  117 KFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            K  AE +  +MD    IRN+ ++AH+DHGK+TL+D+L+A AG+I+ E+AG     D    E  RGITI +  +S+ +E             +G EYLIN+ID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E +RPVL VNK+DR   EL+V+ +E      +VI+N N +I +  E+      ++    G+VAF + L+ WA ++
Sbjct:    5 KKIAERVVALMDKPERIRNIGIVAHIDHGKTTLSDNLLAGAGMISMELAGKQLFMDFDPLEQARGITIDAANVSMVHEY------------EGKEYLINMIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGAMPQTETVLRQALREGVRPVLFVNKVDRMINELKVEKKEMAIRLGRVIDNINKLIRSMDEEHYKAGWRLDAANGSVAFGSALYNWAISV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.757e-44
Identity = 96/218 (44.04%), Postives = 137/218 (62.84%), Query Frame = 3
Query:  117 KFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWA 767
            K   + +  +M     IRN+ ++AH+DHGK+TL+D+L++ AG+I++E+AG     D+  +E  RGITI ++ +S+ +E             +G EYLIN+ID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E++ PVL +NK+DR   EL+VD  E      KVI+  N +I    ED      ++   KGTVAF + L+ WA
Sbjct:    5 KKMVDRVSELMSQPKFIRNIGIVAHIDHGKTTLSDNLLSGAGMISEELAGRQLFMDSDAEEQARGITIDASNVSMVHEY------------EGQEYLINMIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALKEQVVPVLFINKVDRLINELKVDEMEMQVRLAKVIDKVNKLIKGMNEDMYNNGWKLDAAKGTVAFGSALYNWA 210          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_THEON (Elongation factor 2 OS=Thermococcus onnurineus (strain NA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.820e-44
Identity = 92/216 (42.59%), Postives = 135/216 (62.50%), Query Frame = 3
Query:  132 ELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY-EDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            +++ +M     IRNM + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +              +G EYLINLID+PGHVDF  +VT A+R  DGA++VVD +EGV  QTETVLRQAL E ++PVL +NK+DR   EL++   E    F K+I + N ++  Y  +       V  E G+VAF +  + WA ++
Sbjct:   10 KIKELMTQPERIRNMGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHTY------------EGKEYLINLIDTPGHVDFGGDVTRAMRAIDGAIIVVDAVEGVMPQTETVLRQALREYVKPVLFINKVDRLIKELKLGPNEILNRFAKIITDVNRLIKRYAPEEFKNQWLVKVEDGSVAFGSAYYNWALSV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.820e-44
Identity = 90/221 (40.72%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            ++++ +M     IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D  + E ERGITI +  +S+ +E             +G +YLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETVLRQAL E ++PVL VNK+DR   EL++  ++  +   KVI   N ++         + ++    G+ AF + L+ WA ++ +  K
Sbjct:    8 DKIKELMWKPKFIRNIGIVAHIDHGKTTLSDNLLAGAGMISEELAGQQLYLDFDEQEQERGITINAANVSMVHEY------------EGQDYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDAVEGVMPQTETVLRQALKENVKPVLFVNKVDRLIKELELTPQQMQERLIKVITEVNKLIKAMRPDKYSEWKIDVANGSAAFGSALYNWAVSVPSQKK 216          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.675e-43
Identity = 96/221 (43.44%), Postives = 139/221 (62.90%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM-----ATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E +            G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++       ++   L DV      G VAF +  + WA ++
Sbjct:    9 EKVKTLMETHEQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYS------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKEWLCDV----ANGKVAFGSAYNNWAISV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.873e-43
Identity = 96/221 (43.44%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM-----ATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++       ++   L DV      G VAF +  + WA ++
Sbjct:    9 EKVKTLMEKHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYN------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKDWLCDVVT----GKVAFGSAYNNWAISV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.873e-43
Identity = 96/221 (43.44%), Postives = 138/221 (62.44%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM-----ATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL 776
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++       ++   L DV      G VAF +  + WA ++
Sbjct:    9 EKVKTLMETHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYG------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKTEWLCDV----ANGKVAFGSAYNNWAISV 213          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.365e-43
Identity = 96/226 (42.48%), Postives = 139/226 (61.50%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM-----ATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAK 791
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++++AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++       ++   L DV      G VAF +  + WA ++    K
Sbjct:    9 EKVKSLMETHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKDLAGDQLALDFDEEEAARGITIYAANVSMVHEYN------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLIEKMAPEEFKKEWLCDVVT----GKVAFGSAYNNWAISVPYMQK 218          
BLAST of CX046945 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.313e-43
Identity = 94/230 (40.87%), Postives = 141/230 (61.30%), Query Frame = 3
Query:  129 EELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATYED-PLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGV 815
            +E++ +M     IRNM + AH+DHGK+TL+D+L+A AG+I++E+AG   + D  + E  RGITI +  +S+ +E  D             +YL+NLID+PGHVDF  +VT A+R  DGA++VVD +EGV  QTETVLRQAL E ++PVL +NK+DR   EL+++ ++  + F +VI + N ++  Y          V    G+VAF +  + WA ++      Y  K GV
Sbjct:    9 KEIKELMLQPERIRNMGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMIHEYGD------------QKYLVNLIDTPGHVDFGGDVTRAMRAIDGAIIVVDAVEGVMPQTETVLRQALREYVKPVLFINKVDRLIKELKLNPQQMQERFVRVITDVNRLIRKYAPAEFKNKWLVNVNDGSVAFGSAYYNWALSVP-----YMKKTGV 221          
The following BLAST results are available for this feature:
BLAST of CX046945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_METJA4.408e-4443.98Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_METTP5.757e-4444.34Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_METPE5.757e-4444.04Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_THEON9.820e-4442.59Elongation factor 2 OS=Thermococcus onnurineus (st... [more]
EF2_ARCFU9.820e-4440.72Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_METMP1.675e-4343.44Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_METM64.873e-4343.44Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METM54.873e-4343.44Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METVS6.365e-4342.48Elongation factor 2 OS=Methanococcus vannielii (st... [more]
EF2_THESM8.313e-4340.87Elongation factor 2 OS=Thermococcus sibiricus (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046945 ID=CX046945; Name=CX046945; organism=Citrus sinensis; type=EST; length=818bp
GTTCACTCCTTTCTCTCTATTTTTACGGATTGAGACATTTGCAGTCTCTC
TCGCTCGCCGCCTTCGAAAGAAATACTGTTGTTGTTGGTAATATTTGAGA
ATCAGTCAAGATGGTGAAGTTCACAGCAGAAGAGCTCCGGCGTATTATGG
ACTTCAAACATAACATCCGCAATATGTCTGTTATTGCCCATGTTGATCAT
GGGAAGTCAACCCTTACCGACTCTCTTGTGGCTGCTGCTGGTATTATCGC
CCAAGAAGTTGCTGGCGATGTCCGTATGACAGATACTCGTCAGGATGAAG
CTGAGCGTGGTATTACAATCAAGTCTACTGGTATATCTCTCTACTACGAG
ATGACTGATGCGGCTTTGAAGAGCTTCAAGGGAGAGCGTCAAGGGAATGA
ATACCTCATCAACCTTATTGATTCCCCTGGGCACGTCGATTTCTCATCTG
AGGTTACAGCTGCCCTTCGTATCACTGATGGTGCACTTGTGGTCGTAGAC
TGCATTGAAGGTGTTTGTGTCCAAACAGAAACTGTGCTTAGACAAGCCCT
GGGTGAAAGGATTAGGCCAGTCTTGACTGTGAACAAGATGGACAGGTGCT
TCCTTGAGCTTCAGGTTGACGGTGAAGAGGCTTACCAGACTTTCCAGAAA
GTGATTGAGAATGCTAATGTCATTATGGCTACCTATGAAGATCCACTCCT
TGGCGATGTTCAGGTTTACCCTGAAAAGGGAACAGTTGCTTTCTCTGCTG
GTTTGCATGGTTGGGCTTTTACCTTGACAAATTTTGCTAAGATGTATGCA
TCCAAGTTCGGAGTTGAT
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