CX046944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELPY (Elongation factor G OS=Helicobacter pylori GN=fusA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELPS (Elongation factor G OS=Helicobacter pylori (strain Shi470) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELPJ (Elongation factor G OS=Helicobacter pylori J99 GN=fusA PE=3 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELPH (Elongation factor G OS=Helicobacter pylori (strain HPAG1) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELPG (Elongation factor G OS=Helicobacter pylori (strain G27) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELP2 (Elongation factor G OS=Helicobacter pylori (strain P12) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_HELAH (Elongation factor G OS=Helicobacter acinonychis (strain Sheeba) GN=fusA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11 Identity = 59/192 (30.73%), Postives = 89/192 (46.35%), Query Frame = -2 Query: 232 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKG 759 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P+VE FG+S+ LR+AT G+ FDH+ + P + A ++V KRKG Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEV------PSNIAKEIV---EKRKG 692
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG_STRAW (Elongation factor G OS=Streptomyces avermitilis GN=fusA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.996e-11 Identity = 55/169 (32.54%), Postives = 77/169 (45.56%), Query Frame = -2 Query: 310 ETIGPNM-VVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHAD-----AIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHW 798 ET GP V+ G + E SV AG Q A + G LA M G+ + D H A G Q A R A P LLEP+ VE+ PE+++G + LN +RG + +R G + +K +P+ E FG+ LR+ TSG+A FD + Sbjct: 532 ETDGPAYEFVNKVTGGRIPREYIPSVDAGAQEAMQFGILAGYEMTGVRVTLLDGAYHEVDSSELAFKIAGSQAFKEAAR-------KASPVLLEPMMAVEVTTPEESMGDVIGDLNSRRGQIQAMEERSGARV--VKGLVPLSEMFGYVGDLRSKTSGRASYSMQFDSY 691
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG1_BURTA (Elongation factor G 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=fusA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.996e-11 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = -2 Query: 259 KGVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-----DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHV--FEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQL 762 KG ++L+EIK V+ G + K G LA + + + DV + +A G A R AKP LLEP+ VE++ PE+ +G + L+ +RG V E++ G L ++A +P+ E FG+S++LR+AT G+A F H+ S+ E A Q+ Sbjct: 527 KGYEFLDEIKGGVIPREFIPAVNKGIEETLKSGVLAGYPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMR-------RAKPVLLEPMMAVEVETPEEFMGNVMGDLSSRRGIVQGMEDIAGGGGKL--VRAEVPLAEMFGYSTSLRSATQGRATYTMEFKHYAETPSNVSEAVINAKQV 701
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EFG1_BURP1 (Elongation factor G 1 OS=Burkholderia pseudomallei (strain 1710b) GN=fusA1 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11 Identity = 55/184 (29.89%), Postives = 86/184 (46.74%), Query Frame = -2 Query: 259 KGVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-----DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHV--FEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQL 762 KG ++L+EIK V+ G + K G LA + + + DV + +A G A R AKP LLEP+ VE++ PE +G + L+ +RG V E++ G L ++A +P+ E FG+S++LR+AT G+A F H+ S+ E A Q+ Sbjct: 527 KGYEFLDEIKGGVIPREFIPAVNKGIEETLKSGVLAGYPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMR-------RAKPVLLEPMMAVEVETPEDFMGNVMGDLSSRRGIVQGMEDIAGGGGKL--VRAEVPLAEMFGYSTSLRSATQGRATYTMEFKHYAETPSNVSEAVINAKQI 701 The following BLAST results are available for this feature:
BLAST of CX046944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046944 ID=CX046944; Name=CX046944; organism=Citrus sinensis; type=EST; length=931bpback to top |