CX046944

Overview
NameCX046944
Unique NameCX046944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.159e-38
Identity = 87/224 (38.84%), Postives = 130/224 (58.04%), Query Frame = -2
Query:  199 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 870
            R+KIL E+ GWD D A+ IW         N++VD   G+QYL EI+D +V GF+WA + G LA+E MRG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P LLEP+  ++I+     +G + SVLN+ RG + +  Q+    +  ++A LPV+ESF  S  LRAA +G+ F    F  W         P S     V  +RK+KGLKE +   +++
Sbjct:  523 RAKILREKAGWDTDEARGIWAIDDRYF--NVIVDKTTGIQYLREIRDYIVQGFRWAMEAGPLAQEPMRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAVLSARPTLLEPLVRLDIKVAPDYIGSVTSVLNKHRGKILDMTQQ--EYMAYLRAELPVLESFTISDELRAAAAGKIFWSMQFARWAPY------PESMLVDFVKQLRKKKGLKEDIPKPTDF 736          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.373e-38
Identity = 82/224 (36.61%), Postives = 131/224 (58.48%), Query Frame = -2
Query:  199 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 870
            R+KIL E+ GWD D A+ +W         N++VD   G+QYL EI+D ++ GF+WA + G LA+E +RG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P +LEP+  ++I+     +G + SV+N+ RG + +  Q+       ++A LPV+ESF  S  LRAA +G+ F    F  W         P S  +  V  +RK+KGLKE++   +++
Sbjct:  523 RAKILREKAGWDTDEARGVWAIDDRYF--NVIVDKTTGIQYLREIRDYIIQGFRWAMEAGPLAQEPIRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAFLSARPTILEPLVRLDIKVAPDYIGAVTSVINKHRGKILDMTQQEYMAF--LRAELPVLESFTISDELRAAAAGKIFWSMQFSRWAPY------PESMLADFVKQLRKKKGLKEEIPKPTDF 736          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.405e-38
Identity = 92/224 (41.07%), Postives = 127/224 (56.70%), Query Frame = -2
Query:  199 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 870
            R+KIL E+ GWD D A++I          NM+VDM  GVQYL EIKD+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTAKP +LEP+  ++I+ P + +G I +V+ +KRG + E  Q   +    + A +PV ESF  +  LR  T+G+A     F  W  +      P S    LV  IR RKGLK +   L ++
Sbjct:  519 RAKILREQAGWDADEARRIMAIDENL---NMLVDMTTGVQYLREIKDTVIQGFRLAMKEGPLAMEPVRGVKVVLHDAVVHEDPAHRGPAQIFPAVRNAIFAGFLTAKPTILEPILKLDIRTPMEYIGNISTVITKKRGKLIEVQQMETSA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PESMLMDLVSKIRTRKGLKPEPPKLEDF 731          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 6.362e-37
Identity = 88/216 (40.74%), Postives = 128/216 (59.26%), Query Frame = -2
Query:  229 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 876
            K R++IL+++ GWD + A+KIW         N+ VD   GVQYL E+KD+++AGF+ A KEG LA E +RG+   + D V+H D +HRG GQ+ P  R  I+A  L  +P LLEP+  ++I+AP + L  I +VL +KRG +   ++  G  +  I A +PV ESF  +  LR+AT+G+AF    F  W  +      P      L+  IR+RKGL
Sbjct:  519 KDRARILADKAGWDYNEARKIWAIDENI---NVFVDKTAGVQYLREVKDTIIAGFRLALKEGPLAAEPVRGVKVVLHDAVIHEDPVHRGPGQLYPAVRNAIWAGILDGRPTLLEPLQKLDIRAPMEYLSNITAVLTRKRGRII-NVETTGV-MARIIAAIPVAESFDLAGELRSATAGRAFWGVEFYGWAPV------PDQMLQDLIAKIRQRKGL 723          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.085e-36
Identity = 85/217 (39.17%), Postives = 125/217 (57.60%), Query Frame = -2
Query:  220 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQ 870
            R+KIL E+ GWD D A++I          N+++DM  GVQYL E+KD+++ GF+ A +EG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTA+P +LEP+  ++I++P + +G I SV+ +KRG + E  Q   T    + A +PV ESF  +  LR  T+G+A     F  W  +      P +    L+  IR RKGLK +
Sbjct:  521 RAKILREQAGWDADEARRIMAIDENL---NILIDMTTGVQYLREVKDTIIQGFRLAMREGPLAMEPVRGVKVVLHDAVIHEDPAHRGPAQIFPAVRNAIFAGFLTARPTILEPILKLDIRSPMEYIGNISSVITKKRGKLIEVQQMETTA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PENMLMDLIAKIRTRKGLKPE 726          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.491e-35
Identity = 80/214 (37.38%), Postives = 122/214 (57.01%), Query Frame = -2
Query:  229 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 870
            R+K+L ++  WD D A++IW    E    N+ +D   GVQ+L E+KD+++AG++ A KEG LA+E +RG+   + D V+H D  HRG  Q+ P  R  +YAS LT  P LLEP   ++I+ P + +G +  V+ + RG + E +   G     I A +P+ ESF     LR+ T+G+AF    F  W+ +      P     +L+  IR+RKGL
Sbjct:  524 RAKVLRDKVNWDADTARRIWAVDEENF--NIFIDKTVGVQHLREVKDTILAGWRLAMKEGPLAKEPVRGVKVILWDAVIHEDPAHRGPAQLYPAVRNAVYASMLTDSPTLLEPWQKLDIRVPNEYIGAVTGVITKHRGKILEVIDMGGQA--RIVAAVPIAESFELPMELRSVTAGRAFWGTEFYGWEPV------PDQLLPELIRKIRERKGL 727          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
The following BLAST results are available for this feature:
BLAST of CX046944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
EF2_PYRAR1.159e-3838.84Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_PYRCJ3.373e-3836.61Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]
EF2_DESMO4.405e-3841.07Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]
EF2_AERPE6.362e-3740.74Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE... [more]
EF2_DESK11.085e-3639.17Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_IGNH43.491e-3537.38Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_SULSO1.326e-3436.73Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY1.326e-3436.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN1.326e-3436.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM1.326e-3436.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046944 ID=CX046944; Name=CX046944; organism=Citrus sinensis; type=EST; length=931bp
TTTTTTTTTTGATCAGAAAGTGAATGGAATAACAGAATTTGAACGTCCAA
ACTTAAATAAACAGAGGCTACAACAACAAACTCAGATAAGTCAACATTGT
TTCCTTCAAAGAAAAAAACAGAACAAAACCAAAGGCAGCAAAAAATGAAT
CTAGTCGCCAGCAATCGATAATGGCAAAAGCGCTTACAGCTTGTCTTCAT
ATTCAGAGAGGGGGGTCATCTGTTCCTTCAAACCCTTCCTCTTCCTAATA
TCCAAAACAAGCTGTGAAGCCTGGGATCCCGGCTCCAATGGATCAGATGA
CATCATGTCCCAGTGATCAAACACACATTGAGGGAATGCCTGTCCAGAGG
TTGCAGCTCTCAAAGTGCTGGAAAATCCAAAAGACTCAACGACCGGGAGG
TATGCCTTGATGTTATAAAGTGGGGTACCAGGTCTCTGCATCTCCTCAAA
AACGTGACCACGTTTCTGGTTAAGAACACTGTAAATACCACCAAGTGCCT
GTTCAGGAGCTTGGATTTCCACCAAGTAGACAGGCTCAAGAAGCCTTGGT
TTGGCTGTAAGCTGGGATGCATAAATGACCCTTCTAGCAGTTGGAATAAC
CTGGCCACCACCTCTGTGGATAGCATCGGCATGAAGAACCACATCACAAA
CTTCAAAGCAAATGCCCCTCATGTTTTCTTCAGCCAATGCACCTTCCTTT
GATGCCCACTGGAACCCAGCAACAACTGAATCCTTAATTTCATTCAAGTA
CTGAACTCCCTTGCACATATCCACAACCATGTTAGGACCAATGGTCTCAG
GACCAAAACACCAGATTTTCTTGGCAAGATCCTTGTCCCAACCAAATTCC
TCAGACAGAATCTTAGAACGAACCTTANGATCATCCCTTGGACCAATACG
ACCATCATCAATTGCCTCAGCAAGACCTTCC
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