CX046944

Overview
NameCX046944
Unique NameCX046944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL +E  WD D AK+I          N+ VD+  GVQ+L E+ D+V+ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S    +V  IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDEASWDYDEAKRIIAIDENV---NVFVDLTSGVQHLREVMDTVLQGFRLAMKEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 6.583e-34
Identity = 82/226 (36.28%), Postives = 127/226 (56.19%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  ++IL E+  WD D AKKI          N+ V+   GVQ+L E+ D+++ GF+ A KEG LA E +RG+   + D ++H D  HRG  Q+ P  R  I+A  LT+KP LLEP+  ++I+ P   +G +  V+ +KRG +    Q     +  I A +PV ESF  +S LRAA++G+AF    F  W  +      P S    +++ IR+RKGL +++  + ++
Sbjct:  521 KEMARILKEQADWDYDEAKKIVAIDENI---NVFVNATSGVQHLREVMDTILQGFRLAMKEGPLAHEPIRGLKVVLHDAIIHEDPAHRGPAQLYPAVRNAIFAGFLTSKPTLLEPLQKLDIRVPMDFVGNVSGVITRKRGKILNMTQMGS--IARITAEIPVSESFELASELRAASAGRAFWGTEFSRWAPV------PDSLLLDVIMKIRERKGLPKELPKVEDF 735          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 85/226 (37.61%), Postives = 129/226 (57.08%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL ++  WD D AKKI          N+ +D   GVQ+L EI D+++ GF+ A KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT+KP LLEP+  ++I+ P + LG + +V+ +KRG V   +Q     +  + A +PV ESF  +S LRA+++G+AF    F  W  +      P S    L++ IR+RKG  +Q+  + ++
Sbjct:  521 KEMAKILRDQAEWDYDEAKKIVAIDENI---NVFIDATSGVQHLREIMDTLLQGFRLAMKEGPLAFEPVRGVKVVLHDAVVHEDPAHRGPAQLYPAVRNAIFAGILTSKPTLLEPLQKLDIRIPMEYLGNVTAVITRKRGKVINVVQTGN--VARVYAEIPVGESFELASELRASSAGRAFWGTEFSRWAPV------PDSILVDLIMKIRERKGKPKQLPKVEDF 735          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33
Identity = 82/226 (36.28%), Postives = 132/226 (58.41%), Query Frame = -2
Query:  199 KVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 876
            K  +KIL ++  WD D AKKI          N+++D   GVQ+L EI D+++ G++ A +EG LA E +RG+   + D  +H D  HRG  Q+ P  R  I+A+ L +KP LLEP+  ++I+ P + +G + +VL++KRG V   M + G+ +  I A +PV ES+  +S LR +T G+AF    F  W  +      P S  + ++L IR+RKGL +++  + ++
Sbjct:  520 KEMAKILRDQADWDYDEAKKIIAIDENV---NVLIDATSGVQHLREIMDTMLQGYRLAMREGPLAHEPIRGVKVILHDATIHEDPAHRGPAQIYPAVRNAIFAAMLMSKPTLLEPLQKLDIRVPMEFVGNVTAVLSRKRGKVL-NMTQSGS-VARILAEIPVSESYELASDLRGSTGGRAFWGTEFSKWAPV------PDSILTDVILKIRERKGLPKELPKVEDF 734          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.506e-33
Identity = 88/224 (39.29%), Postives = 125/224 (55.80%), Query Frame = -2
Query:  199 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 870
            R KIL E  G DK+ A+ +  F    +G NM ++M KG+QYL E  + ++ GF+ A   G +  E ++GI  ++ DV LH DA+HRG  QVIP  R+ + A  L A P LLEP+  V IQ P+  +GG  S +  +RG V   M+  G  +  IKA +PV E FGF+  +R+AT G+A     F  ++ +      P +     V  IR RKGLK +M   S+Y
Sbjct:  517 RRKILIEA-GMDKEEARNMVNF----VGTNMFLNMTKGIQYLRETMELILEGFEEAITAGPICREPVQGIKAKLVDVKLHEDAVHRGPAQVIPAVRQAVQAGILMANPTLLEPMQYVFIQVPQDQMGGAMSEIQGRRG-VILSMETEG-DMITIKAKMPVAEMFGFAGAIRSATEGRALWSTEFAGFEPI------PANMMLDTVRQIRTRKGLKPEMPTPSDY 727          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.242e-32
Identity = 85/215 (39.53%), Postives = 117/215 (54.42%), Query Frame = -2
Query:  199 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 843
            G DKD AK +        G NM++DM KG+QYLNE  + ++ G   A   G LA+E ++ +   + DV LH DAIHRG  QVIP  R  I    L A   LLEPV  ++I  P   +G   S +  +RG VF +MQ  G  +  +    PV E FGF+  +R+AT G+A     F  ++++      P +    +V+ IRKRKGLKEQM   S+Y
Sbjct:  526 GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELIIEGINEALAGGPLADEPVQNLKMTLTDVKLHEDAIHRGPAQVIPAVRGAIKGGMLIAGDSLLEPVQKIQISVPMDQMGAATSQIQGRRGQVF-DMQSEGDTI-TVVGKAPVAELFGFAGDIRSATEGRAMWNTEFAGFELV------PNNLVKDVVVAIRKRKGLKEQMPTPSDY 728          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.766e-32
Identity = 79/215 (36.74%), Postives = 114/215 (53.02%), Query Frame = -2
Query:  187 DLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEYEDKL 831
            D  +KIWC+ PE    N++VD  KG+  +NEIK+ V  GF+ A  +G L  E MRG+ FE+ D VLHADAIHRG  Q++   + +     L A P L EP+Y VEI  P    G + ++L  KRG   +    PG     I   LPV ESF F+  L++ + G+A     F H+ ++  +  +P S   + V  +RK K +         + D+L
Sbjct:  636 DWIRKIWCYAPEVNPLNLLVDGTKGISIINEIKEHVNTGFRAAVNDGPLIGEVMRGLKFELKDAVLHADAIHRGINQLLQPVKNLCKGLLLAAGPILYEPIYEVEITTPNDYSGAVTTILLSKRGTAEDFKTLPGNDTTMITGTLPVKESFTFNEDLKSGSRGKAGASMRFSHYSILPGNLEDPNSLMFKTVEAVRKLKKMNPAPPTPDSFFDRL 850          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.047e-32
Identity = 82/215 (38.14%), Postives = 117/215 (54.42%), Query Frame = -2
Query:  199 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 843
            G DKD AK +          NM +DM KG+QYLNE  + V+ G++ A + G LA+E ++ +   + DV LH DAIHRG  QVIP  R  + A  L A   LLEP+  ++I  P + +G   S +  +RG VF+ +    T    I    PV E FGF+  +R+AT G+A     F  ++++      P    + +V DIRKRKGLKEQ+    +Y
Sbjct:  526 GMDKDEAKNVKAIE----ATNMFIDMTKGIQYLNETMELVLDGWREALRGGPLADELVQNLKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGVLMAGDSLLEPIQKIQITVPSEQMGAATSQIQGRRGQVFDMLSEGDT--MTIVGKAPVAELFGFAGDIRSATEGRAMWSTEFAGFELV------PAGIVNDVVKDIRKRKGLKEQIPRPDDY 728          
The following BLAST results are available for this feature:
BLAST of CX046944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
EF2_SULIL1.326e-3436.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK1.326e-3436.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA1.326e-3436.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULTO6.583e-3436.28Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_SULAC8.598e-3437.61Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]
EF2_METS51.123e-3336.28Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METTP9.506e-3339.29Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_METB61.242e-3239.53Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_ENCCU2.766e-3236.74Elongation factor 2 OS=Encephalitozoon cuniculi GN... [more]
EF2_METMJ8.047e-3238.14Elongation factor 2 OS=Methanoculleus marisnigri (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046944 ID=CX046944; Name=CX046944; organism=Citrus sinensis; type=EST; length=931bp
TTTTTTTTTTGATCAGAAAGTGAATGGAATAACAGAATTTGAACGTCCAA
ACTTAAATAAACAGAGGCTACAACAACAAACTCAGATAAGTCAACATTGT
TTCCTTCAAAGAAAAAAACAGAACAAAACCAAAGGCAGCAAAAAATGAAT
CTAGTCGCCAGCAATCGATAATGGCAAAAGCGCTTACAGCTTGTCTTCAT
ATTCAGAGAGGGGGGTCATCTGTTCCTTCAAACCCTTCCTCTTCCTAATA
TCCAAAACAAGCTGTGAAGCCTGGGATCCCGGCTCCAATGGATCAGATGA
CATCATGTCCCAGTGATCAAACACACATTGAGGGAATGCCTGTCCAGAGG
TTGCAGCTCTCAAAGTGCTGGAAAATCCAAAAGACTCAACGACCGGGAGG
TATGCCTTGATGTTATAAAGTGGGGTACCAGGTCTCTGCATCTCCTCAAA
AACGTGACCACGTTTCTGGTTAAGAACACTGTAAATACCACCAAGTGCCT
GTTCAGGAGCTTGGATTTCCACCAAGTAGACAGGCTCAAGAAGCCTTGGT
TTGGCTGTAAGCTGGGATGCATAAATGACCCTTCTAGCAGTTGGAATAAC
CTGGCCACCACCTCTGTGGATAGCATCGGCATGAAGAACCACATCACAAA
CTTCAAAGCAAATGCCCCTCATGTTTTCTTCAGCCAATGCACCTTCCTTT
GATGCCCACTGGAACCCAGCAACAACTGAATCCTTAATTTCATTCAAGTA
CTGAACTCCCTTGCACATATCCACAACCATGTTAGGACCAATGGTCTCAG
GACCAAAACACCAGATTTTCTTGGCAAGATCCTTGTCCCAACCAAATTCC
TCAGACAGAATCTTAGAACGAACCTTANGATCATCCCTTGGACCAATACG
ACCATCATCAATTGCCTCAGCAAGACCTTCC
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