CX046944

Overview
NameCX046944
Unique NameCX046944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.133e-28
Identity = 75/220 (34.09%), Postives = 123/220 (55.91%), Query Frame = -2
Query:  229 KVRSKILSEEF---GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGSQASQLVLDIRKRKGL 876
            +V+ K L++ F   G DKD AKK+W    +    ++ V+  +G+QYL+EIK+ ++ GF+ A  +G LA E   GI   + D  +H DA+HRG  QV+P  R+ +Y + + A+P L+EP+  V I  P+  +G     +  +RG + E  Q     +  I++ +PV E FGF+  +R+A  G    +C+   W   +S     P    +++V +IR+RKGL
Sbjct:  512 RVKGKELAKTFQEHGLDKDEAKKVW----DVYKHSIFVNKTRGIQYLDEIKELLMEGFESALDDGPLANEKAMGIKISLMDAKIHEDAVHRGPAQVLPAIRKAVYGAIMLAQPTLMEPMQKVYISVPQDYMGAATREVQNRRGQIVEMGQE--GDMSTIESKVPVSEMFGFAGDIRSAAEG----RCI---WSTENSGFERIPRELQNKIVKEIRERKGL 718          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.050e-28
Identity = 83/224 (37.05%), Postives = 120/224 (53.57%), Query Frame = -2
Query:  199 RSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 870
            R K++  E G  K+ AK I          N+ +D+ KG+QYLNE  + ++ GF+   + G L  E +  +   + D  LH DAIHRG  QVIP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG +   M   G  L  I+A +PV E FGF+  +R+AT G+A     F  +D++      P S  +++V  IR+RKGLK  +   S+Y
Sbjct:  518 RQKLI--ELGMGKEEAKGIVGIH----NSNIFIDITKGIQYLNETMELILDGFEEVMRAGPLTREPVANMKCVLVDAKLHEDAIHRGPAQVIPAARQAIQAGMLMAEDCLLEPYQKVFVQVPQLTMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDIV------PTSIQTEVVGQIRERKGLKRDLPKASDY 727          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.051e-27
Identity = 72/210 (34.29%), Postives = 114/210 (54.29%), Query Frame = -2
Query:  220 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQ 849
            E G +KD AKK+          NM+V+M +G+  L+E ++ ++ GF+   + G LA E ++G+  ++ D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+  +R AT G+      F  ++ +      PG    ++V  IR RKGLK +
Sbjct:  530 EAGLEKDQAKKVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIKLMDATFHEDAIHRGPAQIIPAVRFGVRDAVSQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFEKV------PGELQPKIVKQIRDRKGLKSE 727          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27
Identity = 66/223 (29.60%), Postives = 122/223 (54.71%), Query Frame = -2
Query:  220 KVRSKILSEEF---GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGSQASQLVLDIRKRKGLKEQ 876
            +V+ K +++ F   G DK+ A+++W    +    N+ ++M +G+QYL+EIK+ ++ GF+ A   G +A+E + G+  ++ D  +H DA+HRG  QV+P  R+ I+ + ++A+P LLEP+  V I  P+  +G     +  +RG +    Q     +  +++ +PV E FGF+  +R+AT G+         W   ++     P      +  ++R RKGL  +
Sbjct:  512 RVKGKEMAKNFIEAGMDKEEARRVW----DVYEKNLFINMTRGIQYLDEIKELLMDGFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGRCL-------WSTENAGFERLPNELQHTITREVRTRKGLSPE 721          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27
Identity = 76/218 (34.86%), Postives = 120/218 (55.05%), Query Frame = -2
Query:  199 EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQMTPLSEY 852
            +E G DKD ++ I        G N+++D  KG+Q+LNE  + V+ G + A  +G LA E ++G    + D  LH DAIHRG  QVIP  R  ++ S + A  +LLEP+  V I  P   +G     +  +RG V ++M + G  L  ++   PV E  GFSS +R+AT G+A        + ++ +D L+P       + +IR+RKG+K+++ P  +Y
Sbjct:  522 QEAGMDKDDSQNI----EHIHGTNILLDETKGIQHLNETMELVIEGLEEALDDGPLASEPVQGSLIRLHDARLHEDAIHRGPAQVIPAVREAVHNSLIDASIKLLEPIQQVRIDVPNDHMGAASGEIQGRRGRV-DDMYQEG-DLMVVEGVAPVDEMIGFSSDIRSATEGRASWNTENAGFQVL-ADNLQPDK-----ISEIRERKGMKQELNPAIDY 727          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 77/212 (36.32%), Postives = 114/212 (53.77%), Query Frame = -2
Query:  220 EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGSQASQLVLDIRKRKGLKEQ 852
            EE G   D A+ + C      G N+++DM KG+QYL+E  + ++  F  A  +G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   A   LLEP+  V I  P++ +G + + L Q+RG V E+MQ+ G  +  I A +PV    GF+S +R+AT G+         W+  ++     P      +V  IR+RKGLK +
Sbjct:  524 EEAGLTHDEARGLVCI----YGTNVMLDMTKGIQYLDETMELLIESFNEAMDKGPLANEKVYGLKVSLMDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAGRVLLEPMQKVFISVPQEIMGSVTNELQQRRG-VVEDMQQNGEEI-TIIAKVPVAGMIGFASAIRSATGGKVI-------WNSENAGYQRVPYEMQKDVVAKIRERKGLKPE 722          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.794e-27
Identity = 73/209 (34.93%), Postives = 113/209 (54.07%), Query Frame = -2
Query:  220 GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLE-PGSQASQLVLDIRKRKGLKEQ 843
            G D+D AK + C      G NM+ D+ +G+QYL+E  + ++  F      G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   AK  LLEPV  V I  P++ +G   + + Q+RG + E+M++ G  + ++ A +PV   FGF+S +R AT G+         W   ++   + P      +V  IR+RKGL+++
Sbjct:  527 GIDRDEAKGLVCVE----GTNMMFDVTRGIQYLDETMELLIEAFVEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRVLLEPVQRVFINVPQEEMGAAINEIQQRRG-IIEDMKQEGDEI-SLTAKVPVAGMFGFASAIRGATGGKVL-------WSFENAGYQKVPPELQDSIVRSIRERKGLRQE 722          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.794e-27
Identity = 72/210 (34.29%), Postives = 115/210 (54.76%), Query Frame = -2
Query:  220 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQ 849
            E G DKD AKK+          NM+V+M +G+  L+E ++ ++ GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG +  +M++ G  +  IK+ +PV E FGF+  +R AT G+      F  ++ + ++ L+P     ++   IR RKGLK +
Sbjct:  530 EAGLDKDQAKKVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQIL-DMEQEG-DMSIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPAE-LQP-----KIAKQIRDRKGLKSE 727          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.268e-26
Identity = 76/207 (36.71%), Postives = 108/207 (52.17%), Query Frame = -2
Query:  229 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGL 849
            E G D +LAK I     +    NM  D  KG+QYLNE+ D +V GF  A  EG LA+E +  +   + D  +H D +HRG  Q+ P  R  I+ + + A P L EP   V I  P + +G +   LNQ+RG +  +M++ G  +  I    PV E FGF+  +R ATSG+A      +H    +     P   A Q++  IR+RKGL
Sbjct:  524 ELGMDYELAKGI----VDVYNGNMFFDNTKGIQYLNEVMDLLVDGFHMAMDEGPLAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSRELNQRRGQLI-DMRQEGEVMI-IIGEAPVAEMFGFAGAIRGATSGKAL--WTTEH----AGFKRVPNELAQQIIRQIRQRKGL 718          
BLAST of CX046944 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.268e-26
Identity = 70/210 (33.33%), Postives = 113/210 (53.81%), Query Frame = -2
Query:  220 EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRKRKGLKEQ 849
            E G +++ AKK+          NM+V+M KG+  L+E ++ ++ GF+   K G LA E  +G+  ++ D   H DAIHRG  Q+IP  R  +  +  +AKP LLEP+  + I  P+  +G     +N +RG +  +M++ G  +  IK  +PV E FGF+  +R AT G+      F  ++ +      P    +++V  IR RKGLK +
Sbjct:  530 EAGLEREQAKKVMSI----YNGNMIVNMTKGIVQLDEARELIIEGFKEGVKGGPLASERAQGVKIKLIDATFHEDAIHRGPSQIIPAIRFGVRDAVSSAKPILLEPMQKIYINTPQDYMGDAIREINNRRGQIV-DMEQEG-DMAIIKGSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERV------PNEIQTKVVAQIRDRKGLKSE 727          
The following BLAST results are available for this feature:
BLAST of CX046944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
EF2_METST4.133e-2834.09Elongation factor 2 OS=Methanosphaera stadtmanae (... [more]
EF2_METTE7.050e-2837.05Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_METM52.051e-2734.29Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METTH2.679e-2729.60Elongation factor 2 OS=Methanobacterium thermoauto... [more]
EF2_HALMA2.679e-2734.86Elongation factor 2 OS=Haloarcula marismortui GN=f... [more]
EF2_PICTO5.968e-2736.32Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_THEAC7.794e-2734.93Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_METM77.794e-2734.29Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_THEGJ2.268e-2636.71Elongation factor 2 OS=Thermococcus gammatolerans ... [more]
EF2_METVS2.268e-2633.33Elongation factor 2 OS=Methanococcus vannielii (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B09_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B09-D18-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046944 ID=CX046944; Name=CX046944; organism=Citrus sinensis; type=EST; length=931bp
TTTTTTTTTTGATCAGAAAGTGAATGGAATAACAGAATTTGAACGTCCAA
ACTTAAATAAACAGAGGCTACAACAACAAACTCAGATAAGTCAACATTGT
TTCCTTCAAAGAAAAAAACAGAACAAAACCAAAGGCAGCAAAAAATGAAT
CTAGTCGCCAGCAATCGATAATGGCAAAAGCGCTTACAGCTTGTCTTCAT
ATTCAGAGAGGGGGGTCATCTGTTCCTTCAAACCCTTCCTCTTCCTAATA
TCCAAAACAAGCTGTGAAGCCTGGGATCCCGGCTCCAATGGATCAGATGA
CATCATGTCCCAGTGATCAAACACACATTGAGGGAATGCCTGTCCAGAGG
TTGCAGCTCTCAAAGTGCTGGAAAATCCAAAAGACTCAACGACCGGGAGG
TATGCCTTGATGTTATAAAGTGGGGTACCAGGTCTCTGCATCTCCTCAAA
AACGTGACCACGTTTCTGGTTAAGAACACTGTAAATACCACCAAGTGCCT
GTTCAGGAGCTTGGATTTCCACCAAGTAGACAGGCTCAAGAAGCCTTGGT
TTGGCTGTAAGCTGGGATGCATAAATGACCCTTCTAGCAGTTGGAATAAC
CTGGCCACCACCTCTGTGGATAGCATCGGCATGAAGAACCACATCACAAA
CTTCAAAGCAAATGCCCCTCATGTTTTCTTCAGCCAATGCACCTTCCTTT
GATGCCCACTGGAACCCAGCAACAACTGAATCCTTAATTTCATTCAAGTA
CTGAACTCCCTTGCACATATCCACAACCATGTTAGGACCAATGGTCTCAG
GACCAAAACACCAGATTTTCTTGGCAAGATCCTTGTCCCAACCAAATTCC
TCAGACAGAATCTTAGAACGAACCTTANGATCATCCCTTGGACCAATACG
ACCATCATCAATTGCCTCAGCAAGACCTTCC
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