CX046940

Overview
NameCX046940
Unique NameCX046940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_CHICK (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Gallus gallus GN=DDOST PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.136e-53
Identity = 101/208 (48.56%), Postives = 139/208 (66.83%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAG-SSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+ FF S VQKA   S ++ ++GN +    +S+WVF E G L+   V HH+VGE   P  Y + D +EYS+ I + S   W P+  DD+Q++F  + P+V +T      G Y  +FK+PDVYGVFQFKV+Y RLGYT L  S Q+ VRP +H +YERF+P+AYPYY  AF MM G F+F+IV L+ K
Sbjct:  201 IAGLQARNNARVVFSGSLDFFSDAFFSSAVQKAAPGSKRYSQTGNYELAVALSRWVFKEEGVLRVGAVSHHRVGELAPPNAYTVTDLVEYSIVIEKLSDGKWIPFDGDDIQLEFVRIDPFV-RTFLKRNGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYAGAFSMMVGLFMFSIVFLHMK 407          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_DROME (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Drosophila melanogaster GN=Ost48 PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.083e-49
Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEP-AIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            ++ +QARNNAR++ +GSL  FS+  F + VQ A S + H+ +GN      ISKWVF E G L+  +V+HHK GE   P   Y I D + Y++ I E     W  + + D+Q++F  + P+V   L     G Y A+FK+PDVYGV+QFKV+Y R+GYT L  + Q+ VRP  H +YERF+P+A+PYY SAF MM G F+F+ V L+ K
Sbjct:  227 IAALQARNNARVVFSGSLLFFSDESFTTAVQYAQSGVFHKLAGNRDVAESISKWVFGETGRLRVASVQHHKEGELLPPDQAYTITDPVVYTIGIEELVQGEWRAFKASDIQLEFVRIDPFVRTYLKQTNTGAYQAKFKIPDVYGVYQFKVDYNRVGYTHLYSTTQVSVRPLEHTQYERFIPSAFPYYTSAFSMMIGVFVFSFVFLHFK 434          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_CAEEL (Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Caenorhabditis elegans GN=T09A5.11 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.853e-47
Identity = 95/208 (45.67%), Postives = 131/208 (62.98%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAI-YRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            V  +Q+RNNARI+ TGS  +FSN FF +       S++  +SGN  F T I++WV  E G L+   V HHK GE+  P   Y I +D+ Y++EI E     W P+   DVQ++F  + P+V  TL  +  G     FK+PDV GVF+F V+Y+R+GYT L   +Q+ VRP  H +YERF+ +AYPYY S+F MMAG  +F+IV+LY K
Sbjct:  222 VGGLQSRNNARIVFTGSSELFSNTFFSAKTNSVNPSVQGAQSGNADFATAITRWVMKESGVLRVKTVNHHKKGETVPPVEGYFITEDVVYTIEIEELKNGKWVPFQGKDVQLEFVRIDPFVRATLK-NSNGRLSVAFKLPDVLGVFKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIVYLYHK 428          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OST48_DICDI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit homolog OS=Dictyostelium discoideum GN=ddost PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.568e-40
Identity = 83/213 (38.97%), Postives = 131/213 (61.50%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDE----PAIYRINDDLEYSVEIYEWSGTS--WEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            VS +QARNNAR+  +GSL +FS++ F S        I +++SGN++F+  +  W F ERG L+A  +   K+         P ++ I D+++YS+++ E+ G    W PYV   +Q++  M+ PY+   +  D  G Y   FK+PDVYGVF F+    + GY++L    + P+ P+RH+ YERF+PAA+PYY + F M+ G FIF+I+ L++K
Sbjct:  217 VSSLQARNNARVTFSGSLDLFSDKSFYS-------KIDNKESGNKEFVERLVSWTFQERGILRASELELVKISTESNSTVAPDVFTIKDEVKYSLKVEEFDGIKGKWVPYVGS-LQLEVIMLDPYIRTFIKGDANGLYKIHFKLPDVYGVFTFEASIHKSGYSTLDHIYRKPILPFRHDSYERFIPAAFPYYATCFSMLIGTFIFSIIFLFNK 421          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OSTB_SCHPO (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Schizosaccharomyces pombe GN=SPCC338.15 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.626e-29
Identity = 75/215 (34.88%), Postives = 112/215 (52.09%), Query Frame = -3
Query:  152 VSVVQARNNARILITGSLSMFSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGE---SDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTL-----STDQKGHYFAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFFMMAGFFIFTIVHLYSK 772
            VSV+Q+    R+ ++GS+ M  + +       +  S    KS N  F  +++ WVF  +G L+A N+ + KV E   S   + YRI D++ +S++I         PYV+DDVQ++  M+ PY    L      +    HY A    PD YG F FK+EY+R G T +       +R + HNE+ RFLP AYPYY S F ++  F +F  + L  K
Sbjct:  217 VSVLQSSTGERVGLSGSIDMLKDEYL------SPQSPSFSKS-NFLFARDLTNWVFQRKGVLQATNMTYGKVAEPLESRNASCYRIKDEMIFSIDISLLEDGQQTPYVADDVQLELIMLDPYYRVNLVPVPSDSQTSQHYEAVLVAPDHYGDFTFKIEYKRPGLTPIEEKSTFTLRQFFHNEFPRFLPHAYPYYASCFSVLGAFLLFCGIWLLQK 424          
BLAST of CX046940 vs. ExPASy Swiss-Prot
Match: OSTB_YEAST (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1 OS=Saccharomyces cerevisiae GN=WBP1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 60/182 (32.97%), Postives = 93/182 (51.10%), Query Frame = -3
Query:  242 QARNNARILITGSLSMFSNRFFRSGVQKAGSSIKHEKSGNEQFLTEISKWVFHERGHLKAVNVRH-HKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLS---TDQKGHYF--AEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRH---NEYER 760
            Q  NNAR++  GS     N+                +  N++F  E+ KW F+E+  +K+V+  H H  G S +   Y+I D + YSV   EW+G  W P+++DD+Q +   + PY   TLS    D +  Y+   EF +PD +GVF F  +Y+++G   LS +    V+  RH   +EY R
Sbjct:  222 QNLNNARLVWIGSSDFLKNK---------------NQDSNQEFAKELLKWTFNEKSVIKSVHAVHSHADGTSYDEEPYKIKDKVIYSVGFSEWNGEEWLPHIADDIQFELRQVDPYYRLTLSPSGNDSETQYYTTGEFILPDRHGVFTFLTDYRKIG---LSFTTDKDVKAIRHLANDEYPR 385          
The following BLAST results are available for this feature:
BLAST of CX046940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OST48_CHICK6.136e-5348.56Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_DROME1.083e-4945.67Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OST48_CAEEL3.853e-4745.67Probable dolichyl-diphosphooligosaccharide--protei... [more]
OST48_DICDI1.568e-4038.97Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OSTB_SCHPO1.626e-2934.88Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OSTB_YEAST8.944e-2032.97Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11B07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11B07-D14-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046940 ID=CX046940; Name=CX046940; organism=Citrus sinensis; type=EST; length=774bp
TTTTTTTTTTTTTTTTTGCCTGAAAAATTATAATTGGACAACTTGAAAAC
AAGTTGTTAACATGATAAATATTCTTCTCATGGCATAATAAAAAATATCT
AATCCTGCTCCGAACACTATGGTTTCTCTCAGCATCGAAAGTAAAAATCT
ACTTGCTGTAAAGGTGAACGATGGTGAAAATAAAAAAACCAGCCATCATA
AAAAATGCTGATCCATAATATGGGTAAGCTGCTGGTAAAAATCTTTCGTA
TTCATTGTGTCTGTAGGGCCTGACTGGAATCTGTTTTGATAGGGATAAGC
TGGTGTATCCTAGTCTTTGGTACTCGACCTTGAATTGGAAGACTCCATAA
ACATCTGGAACCTTGAATTCAGCAAAATAGTGACCCTTCTGGTCAGTTGA
TAAGGTTTTCAAAACATAGGGGCTCATCATGTAAAACTGCACTTGAACAT
CATCTGAAACATATGGTTCCCAGCTTGTTCCAGACCACTCATAAATCTCA
ACCGAGTATTCCAAGTCATCATTGATCCTGTAAATTGCAGGTTCATCTGA
TTCTCCAACTTTGTGGTGTCTCACATTCACAGCCTTAAGATGACCTCTTT
CATGGAAAACCCATTTGCTAATTTCTGTCAAAAACTGCTCATTACCTGAT
TTCTCATGTTTAATTGAGCTCCCAGCCTTTTGCACTCCAGATCTGAAGAA
TCGATTGCTGAACATGCTCAATGAGCCAGTGATCAAAATCCGAGCATTAT
TTCTTGCCTGCACAACTGAAACTA
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