CX046924

Overview
NameCX046924
Unique NameCX046924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.319e-46
Identity = 95/136 (69.85%), Postives = 104/136 (76.47%), Query Frame = 1
Query:   79 RRSNVFDPFSLDIWDPFEGFS------SSVANIPSSAR----ETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456
            RRSNVFDPFSLD+WDPF+GF       SS +  PS  R    ET+AFA  RIDWKETPEAHVFKAD+PGL          DG VLQISGERS+EQEEK DKWHRVERSSGKF+RRFRLPEN K +QI+ASMENGVL
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVL 140          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.641e-46
Identity = 93/149 (62.42%), Postives = 109/149 (73.15%), Query Frame = 1
Query:   76 GRRSNVFDPFSLDIWDPFEGFSSSVANIPSS-ARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            GRRSNVFDPFSLD+WDPF+ F     + P+S + E SAF NTR+DWKETPEAHVF+AD+PGL          D RVLQISGER+ E+E+KND WHRVERSSG FMRRFRLPENAK++Q++ASMENGVL               AI+ISG
Sbjct:   10 GRRSNVFDPFSLDVWDPFKDF-----HFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.368e-46
Identity = 95/152 (62.50%), Postives = 107/152 (70.39%), Query Frame = 1
Query:   67 FDSGRRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL-XXXXXXXXXXXXXXXAIDISG 519
            F + +RSN+FDPFSLD WDPF+G  S+       ARET+A  N RIDWKETPEAHV KADLPG+          DGRVLQISGER REQEEK+D WHRVERSSGKF+RRFRLPENAKMD+++A MENGVL                AIDISG
Sbjct:    7 FFTSKRSNIFDPFSLDTWDPFQGIIST-----EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDISG 153          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 9.623e-46
Identity = 93/150 (62.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query:   79 RRSNVFDPFSLDIWDPFEGF---SSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            RRSNVFDPFSLD+WDPF+GF   S S +  P +  + +AFA  RIDWKETPEAHVFKAD+PGL          DG VLQISGER +EQEEK DKWHRVERSSGKF+RRFRLPEN K +QI+ASMENGVL               +I I+G
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.257e-45
Identity = 91/147 (61.90%), Postives = 107/147 (72.79%), Query Frame = 1
Query:   79 RRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            RRSNVFDPFSLD+WDPF+    SV    S   +T+AFAN RIDWKETPE+HVFKADLPG+          +G VL ISG+RS+E+E+KNDKWHRVERSSG+FMRRFRLPENAK+DQ++A MENGVL               AI+ISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSD-NDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.641e-45
Identity = 91/151 (60.26%), Postives = 109/151 (72.19%), Query Frame = 1
Query:   67 FDSGRRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            F  GRRSNVFDPFSLD+WDPF+ F    +++ +   E SAF +TR+DWKETPEAHVFKAD+PGL          D RVLQISGER+ E+E+KND WHRVERSSGKF RRFRLPENAK+++++ASMENGVL               AI+ISG
Sbjct:    7 FFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSA---ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.641e-45
Identity = 93/152 (61.18%), Postives = 111/152 (73.03%), Query Frame = 1
Query:   64 LFDSGRRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            +F   R ++VFDPFS+D++DPF+    +V+N    + ETSAFANTRIDWKETPEAHVFKADLPGL          + RVLQISGER+ E+E+KND WHRVERSSGKFMRRFRLPENAKMDQ++ASMENGVL               +I+ISG
Sbjct:    7 IFGDRRSTSVFDPFSIDVFDPFKELGFTVSN----SGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.800e-45
Identity = 90/147 (61.22%), Postives = 107/147 (72.79%), Query Frame = 1
Query:   79 RRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            RRSNVFDPFSLD+WDPF+    SV    S   +T+AFAN RIDWKETPE+HVFKADLPG+          +G VL ISG+RS+E+E+KNDKWHRVERSSG+FMRRFRLPENAK+DQ++A +ENGVL               AI+ISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSD-NDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.146e-45
Identity = 92/155 (59.35%), Postives = 105/155 (67.74%), Query Frame = 1
Query:   79 RRSNVFDPFSLDIWDPFEGF--------SSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            RR N FDPFSLD+WDP +GF        SSS +  P +  + +AFA  RIDWKETPE HVFKAD+PGL          DG +LQISGERSREQEEK+DKWHRVERSSGKF+RRFRLPEN K +QI+ASMENGVL               +I ISG
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159          
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.815e-44
Identity = 90/147 (61.22%), Postives = 108/147 (73.47%), Query Frame = 1
Query:   79 RRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519
            RRSNVFDPF+ D WDPF+G   S+    S  R+T+AFAN R+DWKETPE+HVFKADLPG+          +G VL ISG+RS+E+E+KNDKWHRVERSSG+FMRRFRLPENAK+DQ++ASMENGVL               AI+ISG
Sbjct:    5 RRSNVFDPFA-DFWDPFDGVFRSLVPATSD-RDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149          
The following BLAST results are available for this feature:
BLAST of CX046924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HS181_ORYSJ4.319e-4669.8518.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP13_SOYBN5.641e-4662.4217.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_HELAN7.368e-4662.5017.6 kDa class I heat shock protein OS=Helianthus ... [more]
HS174_ORYSJ9.623e-4662.0017.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16B_ORYSJ1.257e-4561.9016.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HSP14_SOYBN1.641e-4560.2617.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_SOLPE1.641e-4561.1817.6 kDa class I heat shock protein OS=Solanum per... [more]
HS16A_ORYSJ2.800e-4561.2216.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS177_ORYSJ8.146e-4559.3517.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16C_ORYSJ1.815e-4461.2216.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_11A10_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-11A10-B20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046924 ID=CX046924; Name=CX046924; organism=Citrus sinensis; type=EST; length=777bp
CATTAGTACACACACACAGAAACAGAAGCAAACATAGTGAAACACAGCGA
CATGGCTTTGAGTCTTTTTGATAGTGGCCGGAGGAGCAACGTGTTCGATC
CGTTTTCACTGGACATATGGGATCCCTTTGAAGGGTTCTCATCGTCAGTC
GCTAATATTCCGTCCTCAGCAAGGGAAACATCAGCCTTTGCCAACACAAG
AATTGACTGGAAAGAGACCCCAGAAGCTCATGTGTTTAAGGCTGATCTTC
CGGGGCTGAAGAAGGAAGAGGTGAAGGTGGAGGTTGAAGATGGAAGGGTT
CTGCAGATAAGCGGAGAGAGGAGCAGAGAGCAGGAGGAGAAGAACGACAA
GTGGCACCGTGTTGAGAGGAGCAGTGGCAAGTTCATGAGGAGGTTCCGGT
TGCCTGAGAATGCCAAGATGGATCAGATCAGAGCTAGCATGGAGAACGGT
GTGCTTACTGTCACTGTCCCTAAAGAGGATGTTAAGAAGCCTGAGGTTAA
GGCTATTGACATTTCTGGCTGAGGTTGAGCCCGAGGCCGAGAAGCAAGTT
ATTATACAAAATGATATATCATCTACATATACATCCATGCACATGGCTTT
TTGGCCTTTTGATCAGTTTTCTCTTCTGTCTGAATAATAATATTAATAAT
AGTAAATAAGATTGTAGTGTAGTGTTGTCTACTTGTCTTGTCTTGTTTTT
GTGTTTCTGGTTGTACTTTTGTGATGTGATCTCATGTGTATTATACATGA
AGTTATAAAATGTTTGTTGTAAATTAA
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