CX046924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.340e-30 Identity = 73/150 (48.67%), Postives = 87/150 (58.00%), Query Frame = 1 Query: 79 RRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEE--KND-KWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519 R NV DP S+D W + F + + S A N R+DWKETP AHVF ADLPG+ DG VL ISGER+RE++ KND +WH VERSSGKF RRFRLP A++DQ+ ASM+NGVL AI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPFGA----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.558e-24 Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 112 DIW-----DPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 D+W DPF + + A + R+DWKETPE HV D+PGL + RVL++SGER +E+E+K D WHRVERS GKF R+FRLP+N +D ++A +ENGVL Sbjct: 35 DLWSDRFPDPFRVLEHIPFGVDKD-EASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVL 153
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.927e-24 Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 112 DIW-DPFEGFSSSVANIPSSARE---TSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 D+W D F + IP + + ++ R+DWKETPE HV D+PGL + RVL++SGER +E+++K D WHRVERS GKF R+F+LP+N +D ++A MENGVL Sbjct: 43 DLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVL 161
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 91 VFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLP-GLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 +FD + D W+PF F ++VA A +TSAFANT I+ +ET EA+VF+ADLP G+ +G VL I+GERS +EEK + H +ERS F RF LP++A +D +RASM+ G+L Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGML 128
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.764e-23 Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 97 DPFSLDIWDPFEGFSS--SVANIPSSARETSAFANTR-IDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 +P S+DI +PF S + A PS+A + +T +DWKET AHVF AD+PG+ + +VL+ISG+R+R EEK ++WHRVERSS +F+R RLP NA D + A+++NGVL Sbjct: 34 EPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVL 156
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.145e-22 Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 112 DIW-DPFEGFSSSVANIPSSA-RETS-AFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 D+W D F + IP R+TS A + R+DWKET E H D+PGL + VL++SGER RE+E+K D+WHRVERS GKF R+F+LP+N M+ ++A +ENGVL Sbjct: 40 DLWLDRFPDPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 1 Query: 298 VLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVLXXXXXXXXXXXXXXXAIDISG 519 +LQISGER+ E+E+KND WHRVERSSGKFMR FRLP+NAK+DQ++ASMENGVL AI+ISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.977e-18 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 175 ETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQ--EEKN--DKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 + + + R+DW+ET +AH D+PG+ D RVL+ISGER RE+ E+K D WHR ERS G+F R+ RLP+NA +D I AS++NGVL Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 1 Query: 28 ANIVKHSDMALSLFDSGRRSNVFDPFSLDIWDPFEGFSSSVANIPSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDG-RVLQISGERSR-----EQEEKND--KWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 A +V + A +L G + DPF + P A ++A E +A A R DWKETPEAHV D+PG+ + RVL++SGER R E+E + D +WHR ER++G+F RRFR+P A + ++ A +++GVL Sbjct: 18 AMVVMMAPPAAALVPYGYGYMLDDPFRVLEQSPLRPAGGVAA--AAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.091e-16 Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 130 EGFSSSVANIPSS--ARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 E N PS R+ A A T D KE P ++VF D+PGL + VL ISGER RE+E++ K+ R+ER GKFMR+F LPENA D I A ++GVL Sbjct: 22 EAAGEDSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVL 132 The following BLAST results are available for this feature:
BLAST of CX046924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046924 ID=CX046924; Name=CX046924; organism=Citrus sinensis; type=EST; length=777bpback to top |