CX046924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.268e-13 Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 124 PFEGFSSSVANIPSSA--RETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKND-KWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 P + + N PS R+ A A T D E P A+ F D+PG+ + VL +SGER RE +E K+ R+ER GKFMR+F+LPENA +D+I A +GVL Sbjct: 19 PEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVL 132
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.657e-13 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 172 RETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSR----EQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 R+ A A T D K+ P A+ F D+PGL + R+L ISGER R E++E++ K+ R+ER GKFMR+F LP+NA +D+I A ++GVL Sbjct: 45 RDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVL 143
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.164e-13 Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 142 SSVANIPSSA--RETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKND-KWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 SS ++ PS + A A T D KE P ++VF D+PGL VL ISGER RE EEK K+ R+ER GK MR+F LPENA ++I A ++GVL Sbjct: 25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVL 132
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 160 PSSARETSAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQI--------------SGERSREQEEKND--KWHRVERSSGK---FMRRFRLPENAKMDQIRASMENGVL 456 P + + A +DW+ETP AHVF+ DLPGL DG +L++ +G+ S E+EE+ND +WH ER++G+ + +FRLPE+A D+ A M +GVL Sbjct: 15 PGAGGVVAGEARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVL 132
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP19_ORYSJ (19.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP19.0 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12 Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 154 NIPSSA--RETSAFANTRIDWKE--TPEAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSREQEEKND-----KWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 N P+ A R+ A ANT +D KE A V D+PG+ DG VL ISGER R + +D K+ R+ER GKFMRRF LPE+A +D +RA ++GVL Sbjct: 33 NPPTRAYVRDRRAMANTPMDVKELRASGALVLAVDMPGVAPADVRVEVEDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYKDGVL 142
BLAST of CX046924 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.392e-12 Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 181 SAFANTRIDWKETPEAHVFKADLPGLXXXXXXXXXXDGRVLQISG-------ERSREQEEKNDKWHRVERSSGKFMRRFRLPENAKMDQIRASMENGVL 456 SA A +DW ETP +HV + ++PGL DG VL + G E+ RE+E K+ WH ER +F R LP +++QIRAS++NGVL Sbjct: 25 SASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKERERE-KDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVL 122 The following BLAST results are available for this feature:
BLAST of CX046924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX046924 ID=CX046924; Name=CX046924; organism=Citrus sinensis; type=EST; length=777bpback to top |